Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.2e-49 196.8 93 100.0
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 8.0e-48 193.4 93 97.8
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.8e-47 190.3 93 96.8
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.0e-42 174.1 92 88.0
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.6e-41 170.6 93 87.1
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.7e-40 167.5 92 84.8
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.8e-39 165.6 92 82.6
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.3e-39 165.2 92 81.5
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.8e-38 160.6 92 79.3
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.0e-35 150.6 97 75.3
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.0e-35 150.6 97 75.3
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.0e-35 150.6 97 75.3
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-34 149.4 97 74.2
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.1e-31 138.3 92 69.6
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.4e-30 134.8 92 67.4
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.4e-30 134.8 92 65.2
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.8e-30 134.0 92 65.2
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 9.8e-30 133.3 92 64.1
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.4e-28 129.4 92 63.0
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.4e-28 127.5 92 62.0
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 3.9e-26 121.3 92 57.6
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 1.9e-25 119.0 91 58.2
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 5.6e-25 117.5 92 56.5
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 7.3e-25 117.1 92 56.5
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 1.6e-24 115.9 92 55.4
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 2.8e-24 115.2 92 54.3
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.0e-23 111.3 74 71.6
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.8e-22 107.5 92 51.1
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-21 106.3 96 54.2
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.7e-21 104.8 83 54.2
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.1e-20 103.2 74 66.2
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.9e-20 102.4 92 50.0
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.4e-20 100.9 92 48.9
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.2e-19 99.8 92 48.9
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.6e-19 99.4 112 47.3
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.5e-19 98.2 92 48.9
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 4.6e-19 97.8 85 51.8
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 1.3e-18 96.3 92 51.1
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.6e-18 94.0 90 50.0
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.3e-17 91.3 78 52.6
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.7e-16 87.8 79 48.1
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.2e-16 87.4 60 61.7
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 5.2e-15 84.3 57 64.9
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 4.4e-14 81.3 88 45.5
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 7.6e-14 80.5 88 44.3
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 7.6e-14 80.5 88 44.3
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-13 79.7 55 61.8
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 8.4e-13 77.0 88 43.2
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 1.9e-12 75.9 53 60.4
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.4e-12 75.5 54 57.4
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 4.2e-12 74.7 79 46.8
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.4e-12 74.3 55 58.2
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 7.1e-12 73.9 83 43.4
PSO339G3339 Papaver somniferum HOM05D007230 ORTHO05D004756 9.3e-12 73.6 96 41.7
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.1e-11 72.4 114 36.0
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 2.7e-11 72.0 96 38.5
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 6.0e-11 70.9 101 38.6
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 7.8e-11 70.5 101 38.6
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-10 69.7 101 38.6
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-10 69.7 101 37.6
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-10 69.7 101 38.6
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.9e-10 68.2 50 54.0
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 3.9e-10 68.2 96 36.5
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 5.1e-10 67.8 101 37.6
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 5.1e-10 67.8 101 37.6
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 6.6e-10 67.4 100 37.0
CSS0004170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 8.7e-10 67.0 34 85.3
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-09 65.5 91 35.2
MELO3C029164.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.3e-09 64.7 48 54.2
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 4.3e-09 64.7 91 35.2
MELO3C029851.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.6e-09 64.3 48 56.2
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 5.6e-09 64.3 91 35.2
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 5.6e-09 64.3 91 35.2
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-09 64.3 91 35.2
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 7.3e-09 63.9 91 33.0
Rhsim12G0018900 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.3e-08 63.2 45 60.0
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 1.3e-08 63.2 91 34.1
SHI30625 Sapria himalayana HOM05D007230 ORTHO05D004756 1.3e-08 63.2 71 40.8
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 1.3e-08 63.2 91 35.2
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 1.6e-08 62.8 91 33.0
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 2.1e-08 62.4 91 34.1
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.8e-08 62.0 65 47.7
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 4.8e-08 61.2 90 35.6
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 4.8e-08 61.2 63 46.0
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.1e-07 60.1 39 74.4
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 3.1e-07 58.5 96 31.2
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 1.5e-06 56.2 83 28.9
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 2.6e-06 55.5 87 32.2
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-06 55.5 84 32.1
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.4e-06 54.7 70 40.0
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 4.4e-06 54.7 86 31.4
Psat4g177800 Pisum sativum HOM05D007230 ORTHO05D004756 9.9e-06 53.5 41 53.7


User provided reference genes

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