Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.2e-155 553.1 270 100.0
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 4.4e-139 498.0 301 85.4
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.1e-117 426.0 295 73.2
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.8e-117 425.6 295 72.5
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 1.4e-113 413.3 246 77.6
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 2.1e-112 409.5 296 69.9
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 2.1e-112 409.5 296 69.3
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 8.1e-109 397.5 295 67.5
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 3.1e-108 395.6 246 74.4
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 6.9e-108 394.4 297 66.3
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 9.0e-108 394.0 295 65.1
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 1.5e-107 393.3 266 69.5
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 2.6e-107 392.5 247 72.9
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 5.8e-107 391.3 283 67.5
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 9.9e-107 390.6 238 76.5
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.3e-106 390.2 241 75.9
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.9e-106 389.0 238 76.1
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 2.9e-106 389.0 294 66.3
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 2.9e-106 389.0 298 66.1
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 3.8e-106 388.7 285 66.0
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 3.8e-106 388.7 247 72.1
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 4.9e-106 388.3 253 72.3
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.9e-106 388.3 238 76.1
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 8.4e-106 387.5 247 71.7
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 8.4e-106 387.5 247 71.7
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 1.9e-105 386.3 235 75.7
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 1.9e-105 386.3 287 66.9
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 4.2e-105 385.2 268 69.4
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 7.1e-105 384.4 270 68.5
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 7.1e-105 384.4 258 70.5
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.6e-104 383.3 295 65.1
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.6e-104 383.3 241 73.4
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.6e-104 383.3 287 66.2
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 1.6e-104 383.3 269 68.0
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 1.6e-104 383.3 286 65.0
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 2.1e-104 382.9 237 73.8
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 4.6e-104 381.7 287 66.2
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 4.6e-104 381.7 259 68.3
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 1.0e-103 380.6 287 66.2
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 1.3e-103 380.2 273 68.1
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 3.0e-103 379.0 264 69.7
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 5.1e-103 378.3 231 76.2
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 1.1e-102 377.1 293 64.5
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 1.5e-102 376.7 283 66.1
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 1.5e-102 376.7 286 65.0
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.9e-102 376.3 276 66.7
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 2.5e-102 375.9 260 69.6
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 3.3e-102 375.6 247 71.3
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 4.3e-102 375.2 274 67.5
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 4.3e-102 375.2 237 73.8
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 4.3e-102 375.2 286 65.7
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 5.6e-102 374.8 222 76.1
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 5.6e-102 374.8 295 63.7
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 9.6e-102 374.0 249 69.5
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.3e-101 373.6 258 70.9
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 1.3e-101 373.6 272 65.4
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 1.6e-101 373.2 247 69.2
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.1e-101 372.9 231 74.5
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 2.8e-101 372.5 247 70.4
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 2.8e-101 372.5 247 68.4
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 1.1e-100 370.5 280 64.6
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 1.1e-100 370.5 241 69.7
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 3.1e-100 369.0 290 62.1
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 3.1e-100 369.0 293 61.8
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 4.0e-100 368.6 291 62.9
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 6.9e-100 367.9 273 64.8
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 6.9e-100 367.9 284 64.1
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 1.2e-99 367.1 273 64.8
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 1.2e-99 367.1 290 63.1
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 1.5e-99 366.7 273 64.5
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 2.0e-99 366.3 273 64.5
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 2.0e-99 366.3 273 64.5
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 5.8e-99 364.8 272 64.3
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 1.0e-98 364.0 273 65.6
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 1.3e-98 363.6 261 65.1
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 1.7e-98 363.2 272 64.7
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 2.2e-98 362.8 272 64.3
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 2.9e-98 362.5 265 64.5
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 3.8e-98 362.1 274 64.2
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 6.5e-98 361.3 219 75.3
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 6.5e-98 361.3 277 63.5
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 8.4e-98 360.9 265 64.2
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 1.9e-97 359.8 272 64.0
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 1.9e-97 359.8 261 64.8
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 2.5e-97 359.4 276 63.4
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 3.2e-97 359.0 257 67.3
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 5.5e-97 358.2 273 63.4
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.5e-96 355.5 256 67.6
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 6.0e-96 354.8 296 60.1
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 7.9e-96 354.4 278 61.5
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 1.0e-95 354.0 296 59.8
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.3e-95 353.6 205 78.5
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 3.0e-95 352.4 270 63.7
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 8.7e-95 350.9 219 71.7
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.5e-94 350.1 302 57.9
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 3.3e-94 349.0 243 67.1
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 9.6e-94 347.4 245 66.9
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.3e-93 347.1 264 65.9
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 2.1e-93 346.3 288 59.7
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 4.8e-93 345.1 243 67.9
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 3.8e-90 335.5 229 65.5
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 2.1e-88 329.7 221 67.9
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.1e-84 317.4 273 58.2
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 6.7e-79 298.1 289 55.4
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 2.8e-77 292.7 211 68.7
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 7.2e-73 278.1 243 50.6
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 6.7e-71 271.6 250 51.6
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 2.2e-69 266.5 176 69.3
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.4e-68 263.8 237 51.9
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 4.5e-67 258.8 258 49.2
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 4.5e-67 258.8 207 61.4
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 4.2e-65 252.3 216 52.3
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.2e-64 250.8 158 72.8
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 5.2e-63 245.4 193 63.2
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 8.8e-63 244.6 281 45.2
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 2.0e-54 216.9 154 59.7
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 5.7e-54 215.3 248 44.8
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 1.9e-49 200.3 245 44.5
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 2.8e-45 186.4 107 79.4
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 1.1e-41 174.5 173 53.8
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 9.2e-36 154.8 151 56.3
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 5.8e-30 135.6 139 54.0
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 1.1e-25 121.3 78 69.2
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 1.5e-17 94.4 56 75.0
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 1.7e-10 70.9 37 83.8


User provided reference genes

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