Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035862 Camellia sinensis var. sinensis HOM05D046900 ORTHO05D003092 5.5e-267 923.7 459 100.0
CSS0041569 Camellia sinensis var. sinensis HOM05D046900 ORTHO05D003092 7.7e-261 903.3 459 97.8
Dinv41472 Davidia involucrata HOM05D003107 ORTHO05D003092 6.6e-103 378.6 437 51.9
Actinidia07321 Actinidia chinensis HOM05D003107 ORTHO05D003092 1.1e-86 324.7 379 50.7
Rhsim01G0061100 Rhododendron simsii HOM05D003107 ORTHO05D003092 5.1e-71 272.7 403 44.9
TAR636G3294 Trochodendron aralioides HOM05D003107 ORTHO05D003092 6.7e-55 219.2 451 38.1
Nitab4.5_0003393g0030 Nicotiana tabacum HOM05D009561 ORTHO05D003092 4.7e-24 116.7 409 31.3
GSVIVG01015599001 Vitis vinifera HOM05D003107 ORTHO05D003092 8.3e-21 105.9 203 42.4
CAN.G763.8 Capsicum annuum HOM05D009561 ORTHO05D003092 3.0e-18 97.4 422 30.3
Nitab4.5_0000374g0130 Nicotiana tabacum HOM05D009561 ORTHO05D003092 3.9e-18 97.1 407 29.2
Nn8g39562 Nelumbo nucifera HOM05D003107 ORTHO05D003092 3.1e-15 87.4 412 27.7
QL02p089967 Quercus lobata HOM05D003107 ORTHO05D003092 3.1e-15 87.4 424 28.1
Potri.018G125500 Populus trichocarpa HOM05D003107 ORTHO05D003092 1.4e-12 78.6 125 44.8
Potri.T125307 Populus trichocarpa HOM05D003107 ORTHO05D003092 1.4e-12 78.6 125 44.8
Sabra18G0106800 Salix brachista HOM05D003107 ORTHO05D003092 4.1e-12 77.0 135 42.2
Manes.06G046500 Manihot esculenta HOM05D003107 ORTHO05D003092 1.2e-11 75.5 167 37.7
PGSC0003DMG400006706 Solanum tuberosum HOM05D009561 ORTHO05D003092 2.3e-10 71.2 427 26.7
Peaxi162Scf00088g01216 Petunia axillaris HOM05D009561 ORTHO05D003092 5.0e-10 70.1 224 31.7
Aqoxy7G03629 Aquilegia oxysepala HOM05D003107 ORTHO05D003092 6.6e-10 69.7 403 23.3
Cfa002924 Carpinus fangiana HOM05D003107 ORTHO05D003092 1.6e-08 65.1 193 33.7
Haze_25497 Corylus avellana HOM05D003107 ORTHO05D003092 2.1e-08 64.7 239 30.1
Sopen07g003740 Solanum pennellii HOM05D009561 ORTHO05D003092 8.1e-08 62.8 440 25.7
Sc18g0000310 Simmondsia chinensis HOM05D003107 ORTHO05D003092 1.8e-07 61.6 414 25.8


User provided reference genes

Program Settings