Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035835 Camellia sinensis var. sinensis HOM05D023690 ORTHO05D110911 4.8e-39 164.1 86 100.0
CSS0041622 Camellia sinensis var. sinensis HOM05D023690 ORTHO05D109291 4.1e-22 107.8 86 73.3
CSS0012694 Camellia sinensis var. sinensis HOM05D023690 ORTHO05D109990 9.5e-11 70.1 89 57.3
CSS0037933 Camellia sinensis var. sinensis HOM05D023690 ORTHO05D110578 4.0e-09 64.7 45 80.0
CSS0009530 Camellia sinensis var. sinensis HOM05D023690 ORTHO05D112659 4.4e-08 61.2 34 88.2
Lj2C908G4 Lonicera japonica HOM05D000951 ORTHO05D001597 1.4e-06 56.2 35 80.0
MBI19_g01934_MAGBIO Magnolia biondii HOM05D000951 ORTHO05D001597 2.4e-06 55.5 49 59.2
MBI19_g34089_MAGBIO Magnolia biondii HOM05D000951 ORTHO05D001597 2.4e-06 55.5 49 59.2
Oeu044205.1 Olea europaea HOM05D000951 ORTHO05D001597 2.4e-06 55.5 65 46.2
AUR62001601 Chenopodium quinoa HOM05D000951 ORTHO05D001597 3.1e-06 55.1 49 59.2
ATR0068G079 Amborella trichopoda HOM05D000951 ORTHO05D001597 5.4e-06 54.3 49 57.1
CSS0031990 Camellia sinensis var. sinensis HOM05D000951 ORTHO05D001597 5.4e-06 54.3 26 92.3
CSS0033298 Camellia sinensis var. sinensis HOM05D000951 ORTHO05D001597 5.4e-06 54.3 36 72.2
Cfa019869 Carpinus fangiana HOM05D000951 ORTHO05D001597 5.4e-06 54.3 49 57.1
AUR62020178 Chenopodium quinoa HOM05D000951 ORTHO05D001597 5.4e-06 54.3 26 92.3
COL.COLO4_25291 Corchorus olitorius HOM05D000951 ORTHO05D001597 5.4e-06 54.3 26 92.3
Duzib168G1935 Durio zibethinus HOM05D000951 ORTHO05D001597 5.4e-06 54.3 26 92.3
Eucgr.B03792 Eucalyptus grandis HOM05D000951 ORTHO05D001597 5.4e-06 54.3 26 92.3
Gohir.A09G105000 Gossypium hirsutum HOM05D000951 ORTHO05D001597 5.4e-06 54.3 26 92.3
Gohir.D09G101700 Gossypium hirsutum HOM05D000951 ORTHO05D001597 5.4e-06 54.3 26 92.3
Gorai.006G119100 Gossypium raimondii HOM05D000951 ORTHO05D001597 5.4e-06 54.3 26 92.3
Lsat_1_v5_gn_4_177141 Lactuca sativa HOM05D000951 ORTHO05D001597 5.4e-06 54.3 49 57.1
Os05g0488900 Oryza sativa ssp. japonica HOM05D000951 ORTHO05D001597 5.4e-06 54.3 49 57.1
Prupe.6G154300 Prunus persica HOM05D000951 ORTHO05D001597 5.4e-06 54.3 49 55.1
THA.LOC104820801 Tarenaya hassleriana HOM05D000951 ORTHO05D001597 5.4e-06 54.3 49 57.1
FAN23G2794 Fragaria x ananassa HOM05D000951 ORTHO05D001597 7.0e-06 53.9 30 80.0
COL.COLO4_06727 Corchorus olitorius HOM05D000951 ORTHO05D001597 9.2e-06 53.5 49 55.1
HanXRQChr04g0125521 Helianthus annuus HOM05D000951 ORTHO05D001597 9.2e-06 53.5 49 57.1
QL07p016696 Quercus lobata HOM05D000951 ORTHO05D001597 9.2e-06 53.5 49 55.1
SGA_v2.0_scaffold66G22378 Striga asiatica HOM05D000951 ORTHO05D001597 9.2e-06 53.5 49 57.1


User provided reference genes

Program Settings