Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035810 Camellia sinensis var. sinensis HOM05D049105 ORTHO05D111432 3.8e-58 228.0 119 100.0
CSS0015855 Camellia sinensis var. sinensis HOM05D049105 ORTHO05D112853 1.1e-33 146.7 83 98.8
Actinidia18904 Actinidia chinensis HOM05D000137 ORTHO05D000503 2.3e-15 85.9 92 63.0
Actinidia35119 Actinidia chinensis HOM05D000137 ORTHO05D000503 1.8e-12 76.3 92 50.0
CSS0006093 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D000503 7.7e-11 70.9 82 50.0
Hma1.2p1_0669F.1_g200230 Hydrangea macrophylla HOM05D000137 ORTHO05D000503 3.2e-09 65.5 87 44.8
Dinv10184 Davidia involucrata HOM05D000137 ORTHO05D000503 9.4e-09 63.9 113 41.6
Potri.012G048600 Populus trichocarpa HOM05D000137 ORTHO05D000503 4.7e-08 61.6 82 42.7
Rhsim12G0139300 Rhododendron simsii HOM05D000137 ORTHO05D000503 6.1e-08 61.2 88 55.7
Oeu041174.1 Olea europaea HOM05D000137 ORTHO05D000503 7.9e-08 60.8 96 38.5
Dinv26404 Davidia involucrata HOM05D000137 ORTHO05D000503 1.4e-07 60.1 109 36.7
MSTRG.4567 Avicennia marina HOM05D000137 ORTHO05D000503 3.9e-07 58.5 94 40.4
Ah.11g045270 Amaranthus hybridus HOM05D000137 ORTHO05D000503 6.7e-07 57.8 89 44.9
Nitab4.5_0006613g0010 Nicotiana tabacum HOM05D000137 ORTHO05D000503 6.7e-07 57.8 89 50.6
SalBow1G1721 Salvia bowleyana HOM05D000137 ORTHO05D000503 6.7e-07 57.8 84 44.0
Nitab4.5_0024848g0010 Nicotiana tabacum HOM05D000137 ORTHO05D000503 5.7e-06 54.7 89 49.4
TAR622G0127 Trochodendron aralioides HOM05D000137 ORTHO05D000503 7.4e-06 54.3 94 39.4
Nitab4.5_0005182g0020 Nicotiana tabacum HOM05D000137 ORTHO05D000503 9.7e-06 53.9 84 42.9


User provided reference genes

Program Settings