Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 3.1e-119 431.8 217 100.0
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 8.3e-88 327.4 218 78.9
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 5.4e-87 324.7 216 77.3
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 3.0e-85 318.9 219 76.3
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 2.1e-83 312.8 217 76.0
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 2.6e-81 305.8 227 69.2
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 9.8e-81 303.9 209 75.6
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 9.8e-81 303.9 209 75.6
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 6.4e-80 301.2 209 74.6
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 1.1e-79 300.4 216 73.1
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 5.4e-79 298.1 212 71.7
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 7.0e-79 297.7 204 76.0
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.2e-78 297.0 218 71.1
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 2.7e-78 295.8 200 75.0
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 4.6e-78 295.0 213 71.4
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 1.3e-77 293.5 219 70.8
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 2.3e-77 292.7 208 70.2
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 5.0e-77 291.6 208 69.7
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 5.0e-77 291.6 218 70.2
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 8.6e-77 290.8 214 72.9
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 1.1e-76 290.4 218 69.7
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 1.1e-76 290.4 219 70.8
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 1.5e-76 290.0 213 73.2
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.5e-76 289.3 213 73.2
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 2.5e-76 289.3 204 77.0
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 3.3e-76 288.9 219 69.4
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 4.3e-76 288.5 219 68.0
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 7.3e-76 287.7 213 72.8
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 7.3e-76 287.7 220 70.0
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 7.3e-76 287.7 214 71.5
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 9.5e-76 287.3 218 68.8
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 1.6e-75 286.6 203 72.4
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 8.1e-75 284.3 213 67.6
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 1.1e-74 283.9 216 69.0
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.4e-74 283.5 213 72.3
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 1.8e-74 283.1 218 68.3
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 4.0e-74 282.0 209 72.2
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 6.8e-74 281.2 213 68.5
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 8.9e-74 280.8 215 69.3
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 1.5e-73 280.0 205 71.2
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 2.0e-73 279.6 214 68.2
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 2.6e-73 279.3 218 67.0
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 2.6e-73 279.3 218 67.0
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 2.6e-73 279.3 216 67.1
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 2.6e-73 279.3 218 69.7
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 4.4e-73 278.5 215 67.4
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 7.5e-73 277.7 207 69.6
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 1.3e-72 276.9 217 67.3
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 1.3e-72 276.9 205 72.7
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 1.7e-72 276.6 222 65.8
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 3.7e-72 275.4 217 69.1
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.9e-72 275.0 213 67.6
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 1.4e-71 273.5 215 68.8
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 9.2e-71 270.8 217 67.3
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.2e-70 270.4 218 67.9
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 2.7e-70 269.2 223 67.3
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 7.8e-70 267.7 204 69.6
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.0e-69 267.3 218 66.5
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 2.3e-69 266.2 217 67.3
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 6.6e-69 264.6 213 67.1
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 8.6e-69 264.2 218 66.1
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.6e-69 264.2 144 84.7
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 7.3e-68 261.2 209 69.4
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 9.5e-68 260.8 208 68.8
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 1.2e-67 260.4 210 66.2
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 1.6e-67 260.0 208 68.3
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 2.8e-67 259.2 208 65.9
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 6.2e-67 258.1 204 67.2
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 1.1e-66 257.3 215 66.0
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 1.4e-66 256.9 207 67.1
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 8.9e-66 254.2 202 68.8
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 1.2e-65 253.8 205 65.9
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 2.0e-65 253.1 191 69.6
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 7.6e-65 251.1 202 65.3
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 3.8e-64 248.8 202 64.9
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 7.1e-63 244.6 210 61.9
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.6e-62 243.4 213 64.8
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 7.8e-62 241.1 177 70.6
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 5.1e-61 238.4 207 62.3
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.9e-60 236.5 206 61.7
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 4.3e-60 235.3 206 61.2
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 5.6e-60 235.0 209 62.2
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 5.6e-60 235.0 208 61.5
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 7.3e-60 234.6 206 61.2
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 9.6e-60 234.2 209 62.2
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 9.6e-60 234.2 209 62.2
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 1.6e-59 233.4 210 61.0
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 2.8e-59 232.6 203 62.1
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 3.6e-59 232.3 212 60.4
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 4.7e-59 231.9 122 86.1
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 8.1e-59 231.1 208 61.1
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 4.0e-58 228.8 208 60.1
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.3e-56 223.8 177 67.2
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 2.9e-56 222.6 146 74.0
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 7.8e-54 214.5 169 66.3
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 1.3e-51 207.2 135 71.9
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 2.8e-51 206.1 205 56.6
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 3.2e-47 192.6 155 68.4
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 1.1e-44 184.1 129 67.4
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.4e-42 177.2 122 67.2
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 5.8e-41 171.8 175 56.6
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 2.9e-40 169.5 113 69.0
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 4.6e-38 162.2 97 80.4
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 7.9e-38 161.4 90 82.2
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 2.3e-37 159.8 137 56.2
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 3.3e-36 156.0 141 60.3
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 5.6e-36 155.2 131 56.5
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 3.4e-33 146.0 181 47.0
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 4.6e-30 135.6 213 43.7
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 5.5e-23 112.1 73 72.6
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 1.7e-16 90.5 139 43.9


User provided reference genes

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