Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035717 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 1.5e-74 282.7 135 100.0
CSS0036115 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 4.7e-73 277.7 135 99.3
CSS0050081 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 2.6e-63 245.4 120 96.7
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 1.8e-32 142.9 107 61.7
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 3.4e-31 138.7 96 68.8
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 9.9e-31 137.1 82 75.6
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 2.2e-30 136.0 83 74.7
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 1.4e-29 133.3 101 60.4
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 1.9e-29 132.9 81 75.3
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 1.7e-27 126.3 100 58.0
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 1.9e-26 122.9 84 65.5
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 4.3e-26 121.7 82 64.6
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 7.3e-26 120.9 80 67.5
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 7.3e-26 120.9 110 54.5
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 9.6e-26 120.6 102 57.8
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 1.3e-25 120.2 93 62.4
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 1.6e-25 119.8 94 57.4
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 4.8e-25 118.2 101 56.4
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 8.1e-25 117.5 107 55.1
vmacro08108 Vaccinium macrocarpon HOM05D007775 ORTHO05D009858 8.1e-25 117.5 72 70.8
ATR0706G202 Amborella trichopoda HOM05D007775 ORTHO05D009858 1.1e-24 117.1 87 58.6
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 1.1e-24 117.1 82 63.4
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 1.1e-24 117.1 81 64.2
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 1.8e-24 116.3 89 58.4
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 1.8e-24 116.3 96 59.4
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 3.1e-24 115.5 81 63.0
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 9.0e-24 114.0 81 61.7
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 9.0e-24 114.0 81 61.7
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 1.2e-23 113.6 77 66.2
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 2.6e-23 112.5 79 63.3
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 3.4e-23 112.1 79 62.0
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 4.5e-23 111.7 103 50.5
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 5.8e-23 111.3 96 55.2
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 5.8e-23 111.3 85 61.2
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 5.8e-23 111.3 88 59.1
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 5.8e-23 111.3 97 56.7
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 5.8e-23 111.3 100 54.0
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 9.9e-23 110.5 76 67.1
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 2.2e-22 109.4 97 55.7
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 3.8e-22 108.6 86 60.5
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 4.9e-22 108.2 80 65.0
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 8.4e-22 107.5 102 49.0
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 8.4e-22 107.5 79 58.2
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 1.1e-21 107.1 81 64.2
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 1.4e-21 106.7 83 61.4
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 1.4e-21 106.7 83 61.4
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 2.4e-21 105.9 84 58.3
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 2.4e-21 105.9 83 60.2
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 4.2e-21 105.1 86 53.5
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 7.1e-21 104.4 83 59.0
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 9.3e-21 104.0 83 60.2
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 9.3e-21 104.0 84 58.3
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 9.3e-21 104.0 82 62.2
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 9.3e-21 104.0 83 60.2
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 1.2e-20 103.6 84 57.1
ECA240G4119 Erigeron canadensis HOM05D007775 ORTHO05D009858 1.2e-20 103.6 97 51.5
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 1.2e-20 103.6 97 52.6
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 1.2e-20 103.6 99 56.6
Sc06g0007440 Simmondsia chinensis HOM05D007775 ORTHO05D009858 1.6e-20 103.2 77 63.6
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 1.3e-19 100.1 96 49.0
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 5.1e-19 98.2 89 50.6
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 1.1e-18 97.1 102 48.0
QL06p007898 Quercus lobata HOM05D007775 ORTHO05D009858 1.5e-18 96.7 131 43.5
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 7.4e-18 94.4 95 48.4
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 9.6e-18 94.0 77 58.4
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 1.3e-17 93.6 103 46.6
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 1.6e-17 93.2 106 44.3
AL4G36400 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 2.8e-17 92.4 83 53.0
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 4.8e-17 91.7 103 46.6
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 1.1e-16 90.5 101 44.6
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 1.4e-16 90.1 82 51.2
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 1.4e-16 90.1 106 42.5
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 1.4e-16 90.1 106 42.5
Prupe.8G004900 Prunus persica HOM05D007775 ORTHO05D009858 7.6e-15 84.3 54 72.2
SEGI_15450 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 1.1e-13 80.5 101 40.6
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 3.5e-12 75.5 50 62.0
AL92U10060 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.0e-11 73.9 73 50.7
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 5.1e-11 71.6 65 52.3
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 2.8e-09 65.9 50 60.0
SMO147G0036 Selaginella moellendorffii HOM05D007775 ORTHO05D009858 4.5e-07 58.5 85 38.8
Pp3c21_11960 Physcomitrium patens HOM05D007775 ORTHO05D009858 2.9e-06 55.8 104 27.9


User provided reference genes

Program Settings