Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 4.2e-133 478.0 238 100.0
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 4.5e-127 458.0 238 95.4
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 2.6e-90 335.9 227 72.7
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 1.4e-83 313.5 228 65.8
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 4.4e-82 308.5 226 65.9
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 1.1e-80 303.9 223 64.1
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 4.1e-80 302.0 227 63.0
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 5.3e-80 301.6 226 62.8
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.0e-78 297.4 229 65.1
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 1.3e-78 297.0 226 61.5
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 1.7e-78 296.6 226 60.6
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 2.2e-78 296.2 226 62.4
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 5.0e-78 295.0 226 63.3
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 5.5e-77 291.6 221 62.9
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 1.4e-75 287.0 247 62.8
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 4.0e-75 285.4 226 60.2
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 7.5e-74 281.2 219 61.6
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 1.3e-73 280.4 219 63.5
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 1.7e-73 280.0 226 60.2
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 2.2e-73 279.6 227 58.1
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 3.7e-73 278.9 226 58.4
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 1.4e-72 276.9 224 58.0
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 2.4e-72 276.2 232 59.9
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 3.1e-72 275.8 230 57.4
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 4.1e-72 275.4 228 59.6
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 5.4e-72 275.0 221 59.3
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 7.0e-72 274.6 217 61.3
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 9.1e-72 274.2 232 59.1
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 9.1e-72 274.2 226 56.6
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 9.1e-72 274.2 226 59.7
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.2e-71 273.9 217 60.4
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.6e-71 273.5 226 59.7
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 2.0e-71 273.1 226 59.7
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.7e-71 272.7 226 59.3
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 2.7e-71 272.7 224 57.6
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 3.5e-71 272.3 222 61.3
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 4.5e-71 271.9 227 58.1
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 5.9e-71 271.6 226 58.0
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.0e-70 270.8 226 59.3
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.3e-70 270.4 226 57.1
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 1.7e-70 270.0 224 57.1
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 2.3e-70 269.6 230 57.4
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.8e-70 268.9 226 58.8
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.1e-69 267.3 212 60.4
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 1.1e-69 267.3 226 56.2
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 1.9e-69 266.5 210 61.9
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 1.9e-69 266.5 226 56.2
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 4.7e-68 261.9 225 55.6
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 4.7e-68 261.9 224 56.2
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 6.1e-68 261.5 234 53.4
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 1.0e-67 260.8 225 58.2
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 5.2e-67 258.5 223 57.0
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 1.5e-66 256.9 180 68.3
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 1.5e-66 256.9 227 55.9
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 2.0e-66 256.5 232 55.6
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 2.6e-66 256.1 225 56.9
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 4.4e-66 255.4 229 55.9
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 9.2e-64 247.7 223 54.7
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 1.0e-62 244.2 205 59.0
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 1.7e-62 243.4 225 53.8
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 2.5e-61 239.6 228 50.4
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 4.3e-61 238.8 231 50.6
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.6e-60 236.9 228 51.3
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 3.6e-60 235.7 232 52.6
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 1.4e-59 233.8 232 52.6
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 3.1e-59 232.6 228 53.5
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.0e-58 229.9 226 47.8
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 2.6e-58 229.6 221 51.6
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 5.8e-58 228.4 158 67.1
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 6.4e-57 224.9 224 48.7
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 9.2e-56 221.1 237 47.3
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 6.0e-55 218.4 210 49.5
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 7.8e-55 218.0 224 49.6
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 1.3e-54 217.2 224 49.6
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 1.9e-53 213.4 162 66.7
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 9.5e-53 211.1 223 48.9
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 2.1e-52 209.9 237 47.7
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 4.7e-52 208.8 221 46.2
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.4e-51 207.2 232 43.1
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 3.4e-50 202.6 215 50.2
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 1.2e-47 194.1 230 41.3
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.0e-46 191.0 172 55.2
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 1.9e-45 186.8 171 57.3
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 8.4e-33 144.8 144 52.1
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 2.1e-31 140.2 99 67.7
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 6.0e-31 138.7 137 51.8
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 1.8e-27 127.1 171 41.5
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 5.1e-22 109.0 80 58.8
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 8.7e-22 108.2 100 49.0
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 5.6e-13 79.0 172 28.5


User provided reference genes

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