Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.7e-91 339.3 177 100.0
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.7e-86 322.8 172 95.3
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 3.3e-66 255.4 172 74.4
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 2.8e-65 252.3 175 74.9
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 9.5e-58 227.3 181 67.4
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 9.9e-55 217.2 171 73.7
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 4.9e-54 214.9 174 67.8
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 4.9e-54 214.9 174 67.8
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 8.3e-54 214.2 172 68.0
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.9e-50 203.0 181 63.5
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 4.0e-48 195.3 134 80.6
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 4.0e-48 195.3 179 61.5
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 6.8e-48 194.5 150 64.7
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 5.8e-47 191.4 175 60.6
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 7.6e-47 191.0 250 50.8
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 4.9e-46 188.3 172 61.6
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 1.9e-45 186.4 173 61.8
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 2.7e-44 182.6 181 58.6
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 2.3e-43 179.5 131 72.5
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 3.0e-43 179.1 174 55.2
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 3.9e-43 178.7 171 59.6
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 1.5e-42 176.8 170 55.9
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 9.6e-42 174.1 175 58.9
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 2.8e-41 172.6 176 59.7
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 3.6e-41 172.2 129 70.5
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 8.1e-41 171.0 182 56.0
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 1.1e-40 170.6 175 55.4
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 1.8e-40 169.9 174 59.8
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 3.1e-40 169.1 176 61.4
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 4.0e-40 168.7 173 57.8
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 4.0e-40 168.7 182 56.0
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 9.0e-40 167.5 176 57.4
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 3.4e-39 165.6 143 63.6
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 4.4e-39 165.2 172 52.3
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 4.4e-39 165.2 179 57.0
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 4.4e-39 165.2 174 50.0
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 9.9e-39 164.1 179 57.0
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 9.9e-39 164.1 179 57.0
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.3e-38 163.7 153 64.1
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.7e-38 163.3 174 52.9
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 2.9e-38 162.5 179 55.3
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 2.9e-38 162.5 172 52.9
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 6.4e-38 161.4 185 52.4
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 6.4e-38 161.4 174 52.9
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.1e-37 160.6 178 51.1
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 2.4e-37 159.5 182 56.0
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 2.4e-37 159.5 176 55.1
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 3.2e-37 159.1 179 53.6
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 9.3e-37 157.5 174 55.2
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 1.2e-36 157.1 174 58.0
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.6e-36 156.8 185 51.4
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.7e-35 153.3 175 53.1
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 4.3e-34 148.7 140 57.9
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 7.3e-34 147.9 205 47.3
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 9.6e-34 147.5 180 54.4
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 9.6e-34 147.5 206 47.6
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 1.6e-33 146.7 133 63.9
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 1.6e-33 146.7 175 50.3
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 3.6e-33 145.6 105 71.4
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 5.3e-32 141.7 112 73.2
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 9.0e-32 141.0 179 50.8
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 1.5e-31 140.2 168 49.4
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 2.0e-31 139.8 148 57.4
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 1.3e-30 137.1 105 66.7
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 3.8e-30 135.6 115 65.2
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 3.8e-30 135.6 115 65.2
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 6.4e-30 134.8 178 49.4
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.1e-29 134.0 143 55.9
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 1.9e-29 133.3 175 49.1
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 4.2e-29 132.1 99 67.7
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 9.3e-29 131.0 177 49.7
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 4.6e-28 128.6 135 57.0
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 4.6e-28 128.6 135 57.0
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 7.9e-28 127.9 113 59.3
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 7.9e-28 127.9 105 60.0
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 7.9e-28 127.9 93 66.7
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 1.8e-27 126.7 135 54.1
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 1.8e-27 126.7 135 54.1
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 1.8e-27 126.7 135 54.1
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 1.8e-27 126.7 147 51.7
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 3.9e-27 125.6 87 70.1
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 5.1e-27 125.2 134 52.2
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.1e-26 124.0 134 54.5
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 7.4e-26 121.3 98 67.3
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 3.7e-25 119.0 116 62.9
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 4.8e-25 118.6 171 43.3
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 4.8e-25 118.6 138 51.4
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 8.1e-25 117.9 136 54.4
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.4e-24 117.1 65 84.6
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 1.5e-23 113.6 90 61.1
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 2.0e-23 113.2 142 50.0
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 2.9e-22 109.4 89 61.8
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 6.0e-20 101.7 92 62.0
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 3.9e-19 99.0 62 74.2
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 4.3e-18 95.5 137 43.8
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 3.1e-16 89.4 118 46.6
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 3.1e-16 89.4 118 46.6
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 6.9e-16 88.2 64 60.9
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 2.6e-15 86.3 152 42.1
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 1.4e-13 80.5 97 48.5
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 1.9e-13 80.1 42 83.3
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 2.5e-13 79.7 88 54.5
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 5.5e-13 78.6 99 42.4
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 7.2e-13 78.2 58 63.8
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 7.9e-12 74.7 159 42.1
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 3.1e-08 62.8 52 53.8
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 2.6e-07 59.7 42 61.9
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 2.6e-07 59.7 101 29.7
MBI13_g45115_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 8.5e-06 54.7 58 63.8


User provided reference genes

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