Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035617 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 7.2e-44 180.3 95 100.0
CSS0008945 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.9e-42 174.5 95 95.8
CSS0044029 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 8.8e-42 173.3 95 95.8
CSS0021115 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.6e-41 171.8 95 94.7
CSS0041715 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 4.5e-30 134.4 77 93.5
CSS0017526 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D111394 6.5e-21 104.0 77 79.2
CSS0038513 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 1.4e-15 86.3 52 86.5
Nitab4.5_0007473g0010 Nicotiana tabacum HOM05D007824 ORTHO05D009875 7.7e-14 80.5 53 81.1
Solyc08g006580.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 8.6e-13 77.0 52 78.8
PGSC0003DMG402026306 Solanum tuberosum HOM05D007824 ORTHO05D009875 1.1e-12 76.6 52 78.8
ClCG05G016050 Citrullus lanatus HOM05D007824 ORTHO05D009875 7.2e-12 73.9 55 69.1
Oeu030057.1 Olea europaea HOM05D007824 ORTHO05D009875 2.1e-11 72.4 52 75.0
CiPaw.08G004000 Carya illinoinensis HOM05D007824 ORTHO05D009875 2.8e-11 72.0 54 74.1
Prupe.1G398400 Prunus persica HOM05D007824 ORTHO05D009875 6.1e-11 70.9 54 74.1
MELO3C016940.2 Cucumis melo HOM05D007824 ORTHO05D009875 1.4e-10 69.7 71 57.7
Migut.A00397 Erythranthe guttata HOM05D007824 ORTHO05D009875 1.4e-10 69.7 52 73.1
Migut.E01438 Erythranthe guttata HOM05D007824 ORTHO05D009875 1.8e-10 69.3 52 69.2
CSS0018794 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.0e-10 68.6 36 97.2
Eucgr.C04026 Eucalyptus grandis HOM05D007824 ORTHO05D009875 3.0e-10 68.6 55 69.1
Nn5g27701 Nelumbo nucifera HOM05D007824 ORTHO05D009875 3.0e-10 68.6 52 69.2
Ciclev10010135m.g Citrus clementina HOM05D007824 ORTHO05D009875 4.0e-10 68.2 52 73.1
ClCG08G013840 Citrullus lanatus HOM05D007824 ORTHO05D009875 5.2e-10 67.8 52 65.4
RcHm_v2.0_Chr6g0299081 Rosa chinensis HOM05D007824 ORTHO05D009875 5.2e-10 67.8 54 72.2
Sed0001567 Sechium edule HOM05D007824 ORTHO05D009875 6.8e-10 67.4 52 67.3
Sc23g0006310 Simmondsia chinensis HOM05D007824 ORTHO05D009875 1.5e-09 66.2 52 71.2
Phvul.009G085600 Phaseolus vulgaris HOM05D007824 ORTHO05D009875 5.7e-09 64.3 50 66.0
CiPaw.07G233700 Carya illinoinensis HOM05D007824 ORTHO05D009875 7.5e-09 63.9 42 81.0
Sed0025799 Sechium edule HOM05D007824 ORTHO05D009875 7.5e-09 63.9 52 63.5
Sed0025864 Sechium edule HOM05D007824 ORTHO05D009875 7.5e-09 63.9 52 63.5
Manes.03G006300 Manihot esculenta HOM05D007824 ORTHO05D009875 1.7e-08 62.8 48 66.7
Glyma.04G059451 Glycine max HOM05D007824 ORTHO05D009875 2.2e-08 62.4 53 66.0
unitig_46.g18221 Utricularia gibba HOM05D007824 ORTHO05D009875 3.7e-08 61.6 52 57.7
Lalb_Chr08g0244541 Lupinus albus HOM05D007824 ORTHO05D009875 4.9e-08 61.2 53 66.0
MD08G1050300 Malus domestica HOM05D007824 ORTHO05D009875 6.3e-08 60.8 54 64.8
Thecc.09G011700 Theobroma cacao HOM05D007824 ORTHO05D009875 6.3e-08 60.8 43 72.1
Sed0013399 Sechium edule HOM05D007824 ORTHO05D009875 8.3e-08 60.5 52 59.6
Atru.chr7.2598 Acer truncatum HOM05D007824 ORTHO05D009875 1.1e-07 60.1 55 61.8
Gohir.A13G178900 Gossypium hirsutum HOM05D007824 ORTHO05D009875 1.1e-07 60.1 52 63.5
Gohir.D13G187000 Gossypium hirsutum HOM05D007824 ORTHO05D009875 1.1e-07 60.1 52 63.5
Medtr3g105765 Medicago truncatula HOM05D007824 ORTHO05D009875 1.1e-07 60.1 53 62.3
Duzib168G1878 Durio zibethinus HOM05D007824 ORTHO05D009875 1.4e-07 59.7 52 61.5
Aa31LG3G16350 Aethionema arabicum HOM05D007824 ORTHO05D009875 1.8e-07 59.3 68 52.9
THA.LOC104803330 Tarenaya hassleriana HOM05D007824 ORTHO05D009875 1.8e-07 59.3 52 59.6
Oeu006856.1 Olea europaea HOM05D007824 ORTHO05D009875 2.4e-07 58.9 49 65.3
Potri.018G014101 Populus trichocarpa HOM05D007824 ORTHO05D009875 3.1e-07 58.5 43 69.8
Glyma.06G059900 Glycine max HOM05D007824 ORTHO05D009875 4.1e-07 58.2 53 62.3
MD15G1044500 Malus domestica HOM05D007824 ORTHO05D009875 7.0e-07 57.4 49 61.2
Gohir.A05G062100 Gossypium hirsutum HOM05D007824 ORTHO05D009875 1.6e-06 56.2 42 64.3
Gohir.D05G064600 Gossypium hirsutum HOM05D007824 ORTHO05D009875 2.7e-06 55.5 43 62.8
Gorai.009G065300 Gossypium raimondii HOM05D007824 ORTHO05D009875 3.5e-06 55.1 42 64.3


User provided reference genes

Program Settings