Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 2.0e-132 475.7 231 100.0
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 4.5e-100 368.2 238 76.1
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 3.6e-97 358.6 233 76.0
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 4.5e-92 341.7 238 72.3
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 1.3e-91 340.1 238 71.8
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 8.5e-91 337.4 238 69.7
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 1.9e-90 336.3 238 71.4
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 7.2e-90 334.3 209 79.4
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 4.7e-89 331.6 240 68.3
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 3.0e-88 328.9 239 68.6
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 4.0e-88 328.6 237 69.2
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 4.4e-87 325.1 240 68.8
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 1.3e-86 323.6 246 65.9
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 2.2e-86 322.8 240 66.2
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 2.8e-86 322.4 240 68.3
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 4.8e-86 321.6 238 66.4
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 6.3e-86 321.2 238 68.1
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 3.1e-85 318.9 241 67.2
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 2.7e-84 315.8 239 66.1
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 3.5e-84 315.5 246 64.2
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 4.5e-84 315.1 238 67.2
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 4.5e-84 315.1 241 67.2
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.0e-83 313.9 235 65.5
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.3e-83 313.5 238 66.8
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 1.3e-83 313.5 209 73.2
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 2.3e-83 312.8 240 66.2
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 4.7e-81 305.1 238 63.4
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.4e-80 303.5 238 63.0
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 3.4e-79 298.9 238 62.6
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 9.8e-79 297.4 180 77.8
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 8.3e-78 294.3 238 62.2
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.4e-77 293.5 243 63.8
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 5.4e-77 291.6 238 62.2
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 1.0e-75 287.3 235 60.0
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 1.3e-75 287.0 235 58.7
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 5.0e-75 285.0 252 59.5
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 6.6e-75 284.6 239 62.3
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.9e-74 283.1 253 60.1
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 3.3e-74 282.3 219 64.4
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 3.3e-74 282.3 244 61.9
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 4.3e-74 282.0 241 61.4
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 6.1e-73 278.1 239 59.8
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 1.8e-72 276.6 249 60.6
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 1.8e-72 276.6 244 61.1
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 5.2e-72 275.0 174 80.5
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.2e-71 273.9 224 61.2
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.5e-71 273.5 240 57.9
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 1.5e-71 273.5 239 59.8
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 2.0e-71 273.1 225 62.2
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 2.0e-71 273.1 242 57.4
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 7.5e-71 271.2 244 59.8
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 2.9e-70 269.2 234 57.7
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.9e-69 266.5 252 57.9
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 2.7e-68 262.7 231 60.6
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 6.0e-68 261.5 247 59.1
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 6.0e-68 261.5 268 54.9
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 2.3e-67 259.6 237 58.6
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 3.0e-67 259.2 228 59.2
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 3.0e-67 259.2 228 59.2
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 3.0e-67 259.2 223 60.5
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 3.9e-67 258.8 239 58.6
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 6.6e-67 258.1 199 66.8
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 6.6e-67 258.1 239 55.6
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 3.3e-66 255.8 239 58.2
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 3.6e-65 252.3 234 56.4
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 1.1e-64 250.8 234 58.1
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 3.1e-64 249.2 237 55.7
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 4.0e-64 248.8 236 56.4
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.2e-63 247.3 232 56.5
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.6e-63 246.1 187 66.3
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 3.4e-63 245.7 240 57.1
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 9.8e-63 244.2 237 54.9
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 1.3e-62 243.8 282 51.1
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 1.9e-61 240.0 237 54.9
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 3.2e-61 239.2 283 50.5
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 5.4e-61 238.4 186 62.4
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 1.6e-60 236.9 235 56.2
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 2.7e-60 236.1 237 54.0
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 6.6e-59 231.5 233 54.5
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 3.3e-58 229.2 240 52.5
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 4.3e-58 228.8 237 55.7
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 1.2e-57 227.3 237 55.3
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 6.2e-57 224.9 207 56.5
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 5.2e-56 221.9 188 62.8
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 1.6e-52 210.3 197 53.3
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 2.1e-52 209.9 216 50.0
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 3.5e-52 209.1 214 53.3
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 3.5e-52 209.1 150 65.3
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 1.0e-51 207.6 233 52.4
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 1.5e-50 203.8 186 58.6
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.8e-49 199.5 175 59.4
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 3.6e-49 199.1 209 53.1
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 8.1e-49 198.0 177 55.4
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 5.2e-48 195.3 227 49.8
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 2.0e-47 193.4 129 70.5
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.3e-46 190.7 162 58.0
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.5e-42 177.2 216 44.9
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 6.2e-41 171.8 151 60.9
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.9e-37 160.2 143 60.8
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 1.9e-37 160.2 151 56.3
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 2.5e-34 149.8 183 45.4
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 4.8e-33 145.6 216 37.5
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.2e-31 141.0 212 39.6
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 9.3e-29 131.3 94 64.9
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 1.6e-25 120.6 128 49.2
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 1.5e-23 114.0 60 85.0
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.6e-17 94.0 65 64.6
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.4e-16 90.1 61 72.1
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.5e-15 87.4 84 53.6
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.4e-15 86.3 61 70.5
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 5.8e-15 85.5 93 48.4
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 1.3e-14 84.3 143 37.8
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 5.5e-13 79.0 137 34.3
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.9e-11 72.8 180 32.8
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 6.3e-09 65.5 204 25.5
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 3.4e-07 59.7 37 64.9
QL12p005529 Quercus lobata HOM05D002896 ORTHO05D003263 5.9e-07 58.9 41 73.2
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.0e-06 58.2 38 60.5
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.3e-06 57.8 86 34.9
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.7e-06 57.4 36 63.9
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 6.5e-06 55.5 41 58.5


User provided reference genes

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