Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 1.7e-85 319.3 164 100.0
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 2.0e-73 279.3 164 84.1
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 1.4e-66 256.5 164 80.5
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 7.5e-65 250.8 161 79.5
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 7.5e-65 250.8 161 79.5
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 1.0e-61 240.4 165 75.8
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 8.0e-59 230.7 163 71.2
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 1.2e-57 226.9 159 69.2
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.6e-57 225.7 159 68.6
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 6.3e-56 221.1 158 67.7
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 6.3e-56 221.1 159 66.0
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 5.4e-55 218.0 159 68.6
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 9.1e-55 217.2 165 66.1
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.0e-54 216.1 160 68.1
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 1.0e-53 213.8 146 68.5
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 3.8e-53 211.8 161 65.8
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 5.0e-53 211.5 158 66.5
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 6.5e-53 211.1 142 72.5
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 8.6e-53 210.7 163 64.4
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 4.2e-52 208.4 162 63.6
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 7.2e-52 207.6 161 65.2
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 9.5e-52 207.2 157 65.0
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 9.5e-52 207.2 162 62.3
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.6e-51 206.5 158 64.6
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 3.6e-51 205.3 154 64.9
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 6.1e-51 204.5 165 63.6
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 6.1e-51 204.5 156 64.7
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 8.0e-51 204.1 141 68.1
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.4e-50 203.4 148 65.5
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 1.4e-50 203.4 165 62.4
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 1.8e-50 203.0 157 66.2
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 3.0e-50 202.2 157 61.8
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 3.0e-50 202.2 149 66.4
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 5.2e-50 201.4 147 63.3
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 5.2e-50 201.4 159 66.7
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 5.2e-50 201.4 159 66.7
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 6.8e-50 201.1 161 59.6
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 8.9e-50 200.7 158 60.8
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 8.9e-50 200.7 141 66.7
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 8.9e-50 200.7 162 62.3
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 1.2e-49 200.3 159 66.0
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.5e-49 199.9 163 62.6
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 1.5e-49 199.9 145 64.1
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 2.0e-49 199.5 159 60.4
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.0e-49 199.5 141 66.7
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.6e-49 199.1 144 66.7
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 2.6e-49 199.1 154 64.3
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 3.4e-49 198.7 164 61.0
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 3.4e-49 198.7 145 63.4
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 3.4e-49 198.7 159 62.9
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 5.7e-49 198.0 157 59.9
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 5.7e-49 198.0 145 66.2
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 5.7e-49 198.0 161 60.2
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 7.5e-49 197.6 154 63.0
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 7.5e-49 197.6 164 59.8
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 9.8e-49 197.2 162 59.9
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 9.8e-49 197.2 159 61.0
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 1.3e-48 196.8 157 63.1
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 1.7e-48 196.4 144 64.6
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 1.7e-48 196.4 157 62.4
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 3.7e-48 195.3 144 62.5
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 3.7e-48 195.3 143 63.6
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 3.7e-48 195.3 142 64.8
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 4.9e-48 194.9 162 63.0
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 4.9e-48 194.9 163 62.6
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 8.3e-48 194.1 159 62.3
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 8.3e-48 194.1 144 64.6
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 1.1e-47 193.7 144 63.2
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 1.1e-47 193.7 140 65.7
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 1.8e-47 193.0 156 60.9
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 2.4e-47 192.6 144 62.5
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.4e-47 192.6 163 61.3
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 3.1e-47 192.2 144 63.2
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 3.1e-47 192.2 154 60.4
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 4.1e-47 191.8 158 61.4
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 5.4e-47 191.4 154 59.7
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 7.0e-47 191.0 160 59.4
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 9.2e-47 190.7 156 57.1
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 2.0e-46 189.5 159 58.5
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 2.0e-46 189.5 137 65.7
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 3.5e-46 188.7 161 55.9
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 7.8e-46 187.6 147 60.5
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.0e-45 187.2 157 58.6
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 1.7e-45 186.4 148 62.8
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 5.0e-45 184.9 166 59.0
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 6.6e-45 184.5 154 57.1
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 8.6e-45 184.1 160 56.9
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 8.6e-45 184.1 159 56.0
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 1.1e-44 183.7 140 60.7
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 1.9e-44 183.0 158 57.0
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 1.9e-44 183.0 128 71.9
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.9e-44 183.0 147 56.5
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 2.5e-44 182.6 164 53.0
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 3.3e-44 182.2 144 59.0
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 4.3e-44 181.8 137 62.8
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 5.6e-44 181.4 158 57.0
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 8.0e-43 177.6 133 59.4
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 2.9e-40 169.1 114 72.8
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.9e-40 169.1 111 70.3
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 3.7e-40 168.7 114 71.9
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 8.3e-40 167.5 162 53.7
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 1.1e-39 167.2 135 58.5
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.8e-39 166.4 115 69.6
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 3.2e-39 165.6 146 55.5
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 7.0e-39 164.5 127 63.8
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 6.0e-38 161.4 147 55.1
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 2.5e-36 156.0 127 60.6
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 1.1e-34 150.6 166 48.2
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 2.3e-34 149.4 132 53.8
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.6e-33 146.0 147 49.7
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 9.8e-33 144.1 160 50.6
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 1.3e-29 133.7 138 42.0
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 3.0e-29 132.5 158 46.2
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.6e-27 126.7 77 74.0
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 3.6e-27 125.6 139 44.6
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 1.3e-24 117.1 138 45.7
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 3.7e-24 115.5 139 43.2
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 1.3e-21 107.1 141 42.6
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 1.9e-20 103.2 111 45.9
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 5.6e-20 101.7 103 49.5
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 8.1e-19 97.8 88 54.5
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.1e-18 97.4 59 76.3
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 1.4e-18 97.1 137 39.4
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 5.2e-18 95.1 90 55.6
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 7.6e-17 91.3 64 68.8
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 2.9e-16 89.4 72 59.7
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 1.4e-15 87.0 89 51.7
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 7.8e-14 81.3 139 34.5
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 7.3e-12 74.7 70 51.4
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 6.2e-11 71.6 76 47.4
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 2.6e-09 66.2 41 68.3


User provided reference genes

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