Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035544 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 5.9e-52 207.2 102 100.0
CSS0027816 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 7.0e-45 183.7 102 92.2
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.5e-34 148.7 115 66.1
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.5e-34 148.7 115 66.1
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 8.0e-25 117.1 88 67.0
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 1.7e-22 109.4 84 63.1
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 3.8e-19 98.2 84 60.7
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.7e-14 81.6 90 51.1
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.7e-14 81.6 82 54.9
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 6.4e-14 80.9 83 53.0
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 8.3e-14 80.5 90 51.1
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.2e-13 78.6 90 50.0
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 2.0e-12 75.9 83 50.6
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 1.0e-11 73.6 82 48.8
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 1.7e-11 72.8 82 50.0
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 2.1e-09 65.9 58 56.9
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 4.7e-09 64.7 57 54.4
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 2.3e-08 62.4 88 44.3
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 2.3e-08 62.4 80 40.0
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 6.8e-08 60.8 84 42.9
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 8.9e-08 60.5 88 43.2
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 2.0e-07 59.3 82 42.7
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 2.0e-07 59.3 84 41.7
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 2.6e-07 58.9 80 45.0
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 9.8e-07 57.0 81 43.2
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 2.2e-06 55.8 84 42.9
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 4.9e-06 54.7 68 42.6
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 6.4e-06 54.3 85 41.2
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 8.3e-06 53.9 84 35.7


User provided reference genes

Program Settings