Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 3.5e-45 184.5 88 100.0
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 2.1e-37 158.7 80 92.5
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 1.5e-32 142.5 77 84.4
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 2.0e-32 142.1 76 82.9
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 2.6e-32 141.7 71 90.1
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 2.6e-32 141.7 77 81.8
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 2.6e-32 141.7 77 84.4
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 3.4e-32 141.4 76 78.9
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 4.5e-32 141.0 77 81.8
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 5.8e-32 140.6 77 83.1
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 5.8e-32 140.6 77 83.1
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 2.2e-31 138.7 77 83.1
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 2.2e-31 138.7 77 81.8
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 2.9e-31 138.3 77 76.6
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 2.9e-31 138.3 77 76.6
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 4.9e-31 137.5 79 77.2
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 8.4e-31 136.7 77 77.9
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 2.5e-30 135.2 77 74.0
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 2.5e-30 135.2 77 74.0
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 3.2e-30 134.8 76 77.6
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 4.2e-30 134.4 78 73.1
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 4.2e-30 134.4 77 74.0
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 4.2e-30 134.4 76 76.3
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 5.5e-30 134.0 77 74.0
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 5.5e-30 134.0 77 74.0
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 7.1e-30 133.7 76 73.7
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 7.1e-30 133.7 76 77.6
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 9.3e-30 133.3 74 75.7
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 1.2e-29 132.9 77 75.3
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 1.2e-29 132.9 77 72.7
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 1.6e-29 132.5 77 77.9
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 1.6e-29 132.5 77 72.7
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 2.1e-29 132.1 76 72.4
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 2.1e-29 132.1 76 72.4
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 2.1e-29 132.1 76 72.4
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 2.1e-29 132.1 76 72.4
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 2.1e-29 132.1 77 71.4
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.1e-29 132.1 76 73.7
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 2.1e-29 132.1 76 73.7
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 2.7e-29 131.7 76 73.7
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 2.7e-29 131.7 76 73.7
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 2.7e-29 131.7 76 77.6
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 2.7e-29 131.7 76 73.7
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.7e-29 131.7 76 73.7
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 2.7e-29 131.7 77 74.0
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 3.5e-29 131.3 77 70.1
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 4.6e-29 131.0 76 77.6
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 6.0e-29 130.6 76 75.0
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 6.0e-29 130.6 77 76.6
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 7.9e-29 130.2 76 72.4
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 7.9e-29 130.2 77 72.7
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 7.9e-29 130.2 77 72.7
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 1.0e-28 129.8 76 73.7
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 1.3e-28 129.4 77 74.0
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 1.3e-28 129.4 76 75.0
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 2.3e-28 128.6 77 72.7
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 2.3e-28 128.6 76 77.6
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 2.3e-28 128.6 77 77.9
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 2.3e-28 128.6 77 72.7
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 3.0e-28 128.3 77 72.7
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 3.0e-28 128.3 77 72.7
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 3.0e-28 128.3 78 69.2
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 3.9e-28 127.9 78 69.2
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 3.9e-28 127.9 76 75.0
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 5.1e-28 127.5 77 70.1
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 5.1e-28 127.5 76 72.4
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 6.7e-28 127.1 76 76.3
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 8.7e-28 126.7 77 68.8
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 8.7e-28 126.7 77 70.1
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 8.7e-28 126.7 77 71.4
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 1.1e-27 126.3 87 65.5
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 1.5e-27 125.9 78 69.2
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 1.5e-27 125.9 77 70.1
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 1.5e-27 125.9 77 72.7
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 1.9e-27 125.6 76 72.4
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 1.9e-27 125.6 77 68.8
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 2.5e-27 125.2 76 73.7
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 3.3e-27 124.8 77 71.4
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 3.3e-27 124.8 77 68.8
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 3.3e-27 124.8 75 73.3
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 7.4e-27 123.6 78 71.8
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 1.3e-26 122.9 76 71.1
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 1.3e-26 122.9 77 71.4
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 1.3e-26 122.9 77 76.6
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 1.3e-26 122.9 78 66.7
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 1.3e-26 122.9 78 65.4
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 1.3e-26 122.9 74 73.0
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 1.6e-26 122.5 77 72.7
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 4.8e-26 120.9 77 68.8
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 8.2e-26 120.2 76 69.7
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 2.4e-25 118.6 87 62.1
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 5.3e-25 117.5 77 67.5
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 5.3e-25 117.5 76 67.1
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 5.3e-25 117.5 76 67.1
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 6.9e-25 117.1 80 65.0
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 7.9e-21 103.6 66 69.7
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 1.8e-20 102.4 79 60.8
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 5.1e-20 100.9 78 57.7
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-19 99.0 64 68.8
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 2.2e-18 95.5 91 54.9
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 4.1e-17 91.3 78 50.0
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 4.5e-16 87.8 51 76.5
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 8.5e-15 83.6 46 76.1
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 3.0e-12 75.1 79 44.3
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 3.7e-10 68.2 44 68.2
TPR.G26213 Trifolium pratense HOM05D006982 ORTHO05D008909 1.0e-07 60.1 47 57.4


User provided reference genes

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