Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035518 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 2.3e-123 445.7 235 100.0
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 2.2e-57 226.5 160 73.8
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 2.3e-43 179.9 140 67.9
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 1.1e-37 161.0 138 59.4
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 4.2e-37 159.1 113 69.0
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 4.2e-37 159.1 130 63.1
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 1.2e-36 157.5 113 68.1
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 2.1e-36 156.8 146 57.5
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 2.1e-36 156.8 146 57.5
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 2.7e-36 156.4 167 50.9
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 2.7e-36 156.4 132 59.1
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 1.0e-35 154.5 178 52.8
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 1.8e-35 153.7 228 43.4
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 4.0e-35 152.5 153 52.9
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 5.2e-35 152.1 129 60.5
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 6.8e-35 151.8 209 44.5
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 1.2e-34 151.0 119 61.3
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 1.2e-34 151.0 110 66.4
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 1.5e-34 150.6 137 55.5
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 2.6e-34 149.8 130 58.5
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 2.6e-34 149.8 137 55.5
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 3.4e-34 149.4 152 50.7
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 5.7e-34 148.7 146 55.5
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 5.7e-34 148.7 145 53.8
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 7.5e-34 148.3 168 51.8
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 7.5e-34 148.3 113 61.9
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 7.5e-34 148.3 158 52.5
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 7.5e-34 148.3 199 45.2
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 9.8e-34 147.9 114 63.2
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 9.8e-34 147.9 137 57.7
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 1.3e-33 147.5 113 63.7
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 1.7e-33 147.1 110 63.6
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 1.7e-33 147.1 148 56.1
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 2.2e-33 146.7 123 59.3
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 2.2e-33 146.7 149 51.7
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 2.8e-33 146.4 241 42.3
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 4.8e-33 145.6 114 62.3
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 6.3e-33 145.2 128 58.6
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 1.1e-32 144.4 165 47.3
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 1.4e-32 144.1 199 44.2
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 1.4e-32 144.1 146 53.4
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 3.1e-32 142.9 141 53.2
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 3.1e-32 142.9 114 59.6
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 4.1e-32 142.5 141 53.9
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 5.4e-32 142.1 202 40.6
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 7.0e-32 141.7 150 51.3
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 9.1e-32 141.4 128 55.5
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 1.2e-31 141.0 146 50.7
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.6e-31 140.6 158 49.4
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 2.7e-31 139.8 110 62.7
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 3.5e-31 139.4 126 58.7
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 5.9e-31 138.7 107 61.7
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 5.9e-31 138.7 128 53.9
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 5.9e-31 138.7 155 50.3
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 7.7e-31 138.3 155 50.3
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 7.7e-31 138.3 128 56.2
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 7.7e-31 138.3 109 61.5
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 1.3e-30 137.5 134 53.0
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 1.3e-30 137.5 194 42.3
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 1.3e-30 137.5 113 58.4
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 1.3e-30 137.5 134 50.7
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 1.3e-30 137.5 109 59.6
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 2.2e-30 136.7 110 57.3
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 2.2e-30 136.7 113 55.8
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 2.2e-30 136.7 113 58.4
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 2.9e-30 136.3 134 52.2
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 2.9e-30 136.3 134 52.2
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 2.9e-30 136.3 134 52.2
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 2.9e-30 136.3 134 52.2
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 2.9e-30 136.3 134 52.2
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 2.9e-30 136.3 113 58.4
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 3.8e-30 136.0 123 57.7
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 3.8e-30 136.0 134 52.2
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 3.8e-30 136.0 158 47.5
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 3.8e-30 136.0 109 57.8
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 5.0e-30 135.6 110 59.1
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 5.0e-30 135.6 189 42.3
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 5.0e-30 135.6 109 56.9
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 6.5e-30 135.2 159 49.1
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 6.5e-30 135.2 99 66.7
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 8.5e-30 134.8 134 51.5
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 1.1e-29 134.4 134 52.2
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 1.1e-29 134.4 167 46.1
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 1.5e-29 134.0 110 59.1
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 1.5e-29 134.0 109 59.6
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 3.2e-29 132.9 109 59.6
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 4.2e-29 132.5 138 53.6
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 9.5e-29 131.3 104 60.6
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 1.2e-28 131.0 123 54.5
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 1.2e-28 131.0 134 50.7
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 1.2e-28 131.0 134 50.7
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 1.6e-28 130.6 134 51.5
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 2.1e-28 130.2 134 50.7
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 2.1e-28 130.2 107 57.9
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 3.6e-28 129.4 134 50.7
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 4.7e-28 129.0 134 48.5
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 4.7e-28 129.0 134 50.0
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 1.0e-27 127.9 123 52.8
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 1.0e-27 127.9 134 49.3
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 1.0e-27 127.9 134 49.3
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 1.0e-27 127.9 134 49.3
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 1.3e-25 120.9 109 55.0
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 1.8e-24 117.1 109 52.3
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 3.8e-22 109.4 160 39.4
Lj7A749G60 Lonicera japonica HOM05D006422 ORTHO05D007992 2.3e-19 100.1 108 50.9
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 2.6e-18 96.7 110 41.8
CiPaw.08G017800 Carya illinoinensis HOM05D006422 ORTHO05D007992 4.4e-18 95.9 161 39.1
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 6.4e-17 92.0 111 46.8
AagrBONN_evm.TU.Sc2ySwM_228.4709 Anthoceros agrestis HOM05D006422 ORTHO05D007992 2.4e-16 90.1 111 39.6
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 2.4e-16 90.1 110 36.4
Ah.11g043920 Amaranthus hybridus HOM05D006422 ORTHO05D007992 1.6e-15 87.4 154 39.0
Gorai.002G101300 Gossypium raimondii HOM05D006422 ORTHO05D007992 6.6e-14 82.0 54 70.4
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 7.5e-10 68.6 181 27.1
Hund19396 Selenicereus undatus HOM05D006422 ORTHO05D007992 7.0e-08 62.0 73 46.6
MCO15G093 Micromonas commoda HOM05D006422 ORTHO05D007992 2.7e-07 60.1 91 36.3
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 1.3e-06 57.8 97 28.9


User provided reference genes

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