Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035511 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 7.3e-68 260.4 127 100.0
CSS0039809 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 6.6e-61 237.3 127 91.3
CSS0007537 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 1.2e-59 233.0 127 89.8
CSS0041785 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 2.0e-57 225.7 127 88.2
CSS0002196 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 6.2e-43 177.6 131 71.0
CSS0033051 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 2.4e-42 175.6 136 69.9
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 4.8e-27 124.8 134 58.2
Zm00001eb262430 Zea mays HOM05D001847 ORTHO05D004854 2.9e-24 115.5 106 64.2
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 1.9e-23 112.8 134 53.7
unitig_807.g34417 Utricularia gibba HOM05D000920 ORTHO05D000626 4.2e-23 111.7 117 57.3
Zm00001eb264000 Zea mays HOM05D000920 ORTHO05D004854 1.6e-22 109.8 106 63.2
Zm00001eb264050 Zea mays HOM05D000920 ORTHO05D004854 2.8e-19 99.0 105 59.0
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 4.1e-18 95.1 146 43.8
unitig_683.g34677 Utricularia gibba HOM05D000920 ORTHO05D000626 4.5e-17 91.7 100 56.0
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 4.5e-17 91.7 100 56.0
unitig_177.g32847 Utricularia gibba HOM05D000920 ORTHO05D004854 1.6e-14 83.2 63 71.4
A04p09260 Brassica napus HOM05D000920 ORTHO05D003704 3.6e-14 82.0 76 63.2
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 3.3e-12 75.5 43 88.4
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 3.3e-12 75.5 42 88.1
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 3.3e-12 75.5 42 88.1
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 3.3e-12 75.5 41 87.8
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 3.3e-12 75.5 41 87.8
PRCOL_00001067 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 3.3e-12 75.5 76 53.9
PRCOL_00001107 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 3.3e-12 75.5 76 53.9
HPP92_007077 Vanilla planifolia HOM05D000920 ORTHO05D004854 3.3e-12 75.5 158 42.4
unitig_724.g29527 Utricularia gibba HOM05D000920 ORTHO05D004854 7.4e-12 74.3 77 61.0
Sc21g0003270 Simmondsia chinensis HOM05D000920 ORTHO05D004854 2.8e-11 72.4 43 81.4
Zm00001eb437520 Zea mays HOM05D010106 ORTHO05D000626 3.7e-11 72.0 79 49.4
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 6.3e-11 71.2 76 59.2
Zm00001eb262130 Zea mays HOM05D010106 ORTHO05D000626 6.3e-11 71.2 42 81.0
Zm00001eb263800 Zea mays HOM05D010106 ORTHO05D000626 6.3e-11 71.2 42 81.0
Zm00001eb263830 Zea mays HOM05D010106 ORTHO05D000626 6.3e-11 71.2 42 81.0
Zm00001eb439260 Zea mays HOM05D010106 ORTHO05D000626 6.3e-11 71.2 42 81.0
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 8.2e-11 70.9 42 83.3
unitig_161.g31392 Utricularia gibba HOM05D001018 ORTHO05D000626 8.2e-11 70.9 60 66.7
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 1.8e-10 69.7 42 85.7
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 2.4e-10 69.3 42 81.0
unitig_161.g31377 Utricularia gibba HOM05D000920 ORTHO05D000626 3.1e-10 68.9 102 51.0
Oeu043254.2 Olea europaea HOM05D000920 ORTHO05D022949 5.3e-10 68.2 41 80.5
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 9.1e-10 67.4 43 79.1
Zm00001eb436930 Zea mays HOM05D010106 ORTHO05D000626 1.5e-09 66.6 132 39.4
Sopen07g009370 Solanum pennellii HOM05D000920 ORTHO05D000626 2.0e-09 66.2 42 78.6
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 5.9e-09 64.7 42 81.0
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 7.7e-09 64.3 43 76.7
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 1.0e-08 63.9 38 84.2
A05p22020 Brassica napus HOM05D000920 ORTHO05D004854 1.3e-08 63.5 43 74.4
CsaV3_6G018510 Cucumis sativus L. HOM05D012847 ORTHO05D014920 1.3e-08 63.5 54 61.1
CDE02G3641 Ceratophyllum demersum HOM05D012847 ORTHO05D014920 1.7e-08 63.2 87 48.3
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 2.2e-08 62.8 30 100.0
CBR_g56703 Chara braunii HOM05D010018 ORTHO05D004854 2.9e-08 62.4 87 46.0
HPP92_006525 Vanilla planifolia HOM05D000920 ORTHO05D004854 5.0e-08 61.6 63 57.1
unitig_675.g29244 Utricularia gibba HOM05D000920 ORTHO05D003704 6.5e-08 61.2 37 78.4
unitig_796.g33546 Utricularia gibba HOM05D000920 ORTHO05D000626 6.5e-08 61.2 37 78.4
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 8.5e-08 60.8 39 82.1
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 8.5e-08 60.8 39 82.1
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 8.5e-08 60.8 39 82.1
Nn085s42708 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn085s42709 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn3g20606 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn3g20607 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn5g31238 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn5g31239 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn5g31261 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn5g31262 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32713 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32714 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32747 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32748 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32841 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32842 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32904 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32905 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32926 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32927 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g32946 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g33096 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g33097 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g33155 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g33159 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g33160 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Nn6g33174 Nelumbo nucifera HOM05D000920 ORTHO05D012001 8.5e-08 60.8 29 100.0
Oeu024742.1 Olea europaea HOM05D007167 ORTHO05D001679 1.9e-07 59.7 40 72.5
Sc11g0005300 Simmondsia chinensis HOM05D012847 ORTHO05D014920 1.9e-07 59.7 73 47.9
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 2.5e-07 59.3 43 72.1
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 2.5e-07 59.3 29 96.6
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 2.5e-07 59.3 29 96.6
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 2.5e-07 59.3 29 96.6
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 2.5e-07 59.3 29 96.6
unitig_676.g29554 Utricularia gibba HOM05D000920 ORTHO05D004854 5.5e-07 58.2 70 51.4
Lsat_1_v5_gn_4_174220 Lactuca sativa HOM05D012847 ORTHO05D014920 7.2e-07 57.8 69 50.7
PGSC0003DMG400001030 Solanum tuberosum HOM05D000920 ORTHO05D004854 9.4e-07 57.4 65 49.2
unitig_668.g29654 Utricularia gibba HOM05D000920 ORTHO05D004854 9.4e-07 57.4 106 44.3
Zm00001eb262370 Zea mays HOM05D010106 ORTHO05D000626 9.4e-07 57.4 31 80.6
Sc21g0003540 Simmondsia chinensis HOM05D007167 ORTHO05D000922 1.6e-06 56.6 44 63.6
Sopen07g009440 Solanum pennellii HOM05D000920 ORTHO05D004854 2.1e-06 56.2 78 52.6
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 2.7e-06 55.8 27 100.0
Sopen00g001690 Solanum pennellii HOM05D000920 ORTHO05D000626 3.6e-06 55.5 33 78.8
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 4.7e-06 55.1 31 83.9
ECA240G4657 Erigeron canadensis HOM05D000920 ORTHO05D004854 6.1e-06 54.7 27 92.6
Sopen00g001770 Solanum pennellii HOM05D000920 ORTHO05D004854 6.1e-06 54.7 117 41.0


User provided reference genes

Program Settings