Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035504 Camellia sinensis var. sinensis HOM05D003511 ORTHO05D004403 9.2e-172 606.7 283 100.0
CSS0003612 Camellia sinensis var. sinensis HOM05D003511 ORTHO05D004403 3.2e-164 581.6 283 94.7
CSS0042293 Camellia sinensis var. sinensis HOM05D003511 ORTHO05D004403 3.2e-164 581.6 283 94.7
CSS0033371 Camellia sinensis var. sinensis HOM05D003511 ORTHO05D004403 2.1e-163 578.9 280 97.5
Dinv42203 Davidia involucrata HOM05D003511 ORTHO05D004403 3.1e-151 538.5 280 89.3
Hma1.2p1_1518F.1_g288460 Hydrangea macrophylla HOM05D003511 ORTHO05D004403 4.9e-149 531.2 280 87.1
Rhsim11G0158000 Rhododendron simsii HOM05D003511 ORTHO05D004403 7.1e-148 527.3 280 86.4
vmacro01992 Vaccinium macrocarpon HOM05D003511 ORTHO05D004403 7.1e-148 527.3 280 86.8
Rhsim11G0156500 Rhododendron simsii HOM05D003511 ORTHO05D004403 2.1e-147 525.8 280 86.1
Oeu029532.2 Olea europaea HOM05D003511 ORTHO05D004403 1.9e-145 519.2 280 84.3
Actinidia34394 Actinidia chinensis HOM05D003511 ORTHO05D004403 1.3e-144 516.5 280 86.1
DCAR_001655 Daucus carota HOM05D003511 ORTHO05D004403 2.4e-143 512.3 280 83.9
HanXRQChr09g0251071 Helianthus annuus HOM05D003511 ORTHO05D004403 2.4e-143 512.3 280 84.3
Potri.009G093900 Populus trichocarpa HOM05D003511 ORTHO05D004403 4.0e-143 511.5 280 83.2
Hma1.2p1_1518F.1_g288470 Hydrangea macrophylla HOM05D003511 ORTHO05D004403 5.3e-143 511.1 280 83.6
QL11p032729 Quercus lobata HOM05D003511 ORTHO05D004403 5.3e-143 511.1 279 84.2
GSVIVG01037900001 Vitis vinifera HOM05D003511 ORTHO05D004403 9.0e-143 510.4 280 83.9
Nitab4.5_0003699g0020 Nicotiana tabacum HOM05D003511 ORTHO05D004403 3.4e-142 508.4 280 84.3
Cfa004603 Carpinus fangiana HOM05D003511 ORTHO05D004403 1.0e-141 506.9 280 83.6
Nn5g30453 Nelumbo nucifera HOM05D003511 ORTHO05D004403 1.0e-141 506.9 280 82.9
CiPaw.05G013100 Carya illinoinensis HOM05D003511 ORTHO05D004403 1.7e-141 506.1 280 82.9
Manes.10G075800 Manihot esculenta HOM05D003511 ORTHO05D004403 1.7e-141 506.1 279 83.5
Lsat_1_v5_gn_9_111920 Lactuca sativa HOM05D003511 ORTHO05D004403 2.9e-141 505.4 280 83.6
Sabra09G0072200 Salix brachista HOM05D003511 ORTHO05D004403 2.9e-141 505.4 280 83.2
Prupe.8G137300 Prunus persica HOM05D003511 ORTHO05D004403 6.5e-141 504.2 280 82.9
Lj5C215T12 Lonicera japonica HOM05D003511 ORTHO05D004403 8.4e-141 503.8 280 83.2
Nitab4.5_0001480g0130 Nicotiana tabacum HOM05D003511 ORTHO05D004403 1.4e-140 503.1 280 83.2
Oeu013759.1 Olea europaea HOM05D003511 ORTHO05D004403 1.4e-140 503.1 280 82.5
PGR142G1515 Punica granatum HOM05D003511 ORTHO05D004403 7.1e-140 500.7 280 83.2
FAN27G0709 Fragaria x ananassa HOM05D003511 ORTHO05D004403 1.2e-139 500.0 280 82.5
Eucgr.I01093 Eucalyptus grandis HOM05D003511 ORTHO05D004403 1.6e-139 499.6 280 81.8
FAN15G2851 Fragaria x ananassa HOM05D003511 ORTHO05D004403 1.6e-139 499.6 280 82.5
FAN20G1862 Fragaria x ananassa HOM05D003511 ORTHO05D004403 2.1e-139 499.2 280 82.5
Duzib052G0193 Durio zibethinus HOM05D003511 ORTHO05D004403 7.9e-139 497.3 280 81.1
RcHm_v2.0_Chr6g0254541 Rosa chinensis HOM05D003511 ORTHO05D004403 1.0e-138 496.9 280 81.8
FvH4_2g04810 Fragaria vesca HOM05D003511 ORTHO05D004403 1.3e-138 496.5 280 82.1
TWI79G1106 Tripterygium wilfordii HOM05D003511 ORTHO05D004403 1.3e-138 496.5 280 80.7
Atru.chr5.2454 Acer truncatum HOM05D003511 ORTHO05D004403 1.8e-138 496.1 280 81.1
DCAR_001656 Daucus carota HOM05D003511 ORTHO05D004403 3.0e-138 495.4 280 81.1
ECA240G1815 Erigeron canadensis HOM05D003511 ORTHO05D004403 3.9e-138 495.0 280 80.4
Aqoxy6G02835 Aquilegia oxysepala HOM05D003511 ORTHO05D004403 5.1e-138 494.6 280 80.7
ClCG05G010350 Citrullus lanatus HOM05D003511 ORTHO05D004403 5.1e-138 494.6 280 81.1
FAN15G0970 Fragaria x ananassa HOM05D003511 ORTHO05D004403 6.7e-138 494.2 280 81.4
Lj5A215G58 Lonicera japonica HOM05D003511 ORTHO05D004403 1.9e-137 492.7 280 82.1
MD10G1099200 Malus domestica HOM05D003511 ORTHO05D004403 1.9e-137 492.7 280 81.4
Migut.B00398 Erythranthe guttata HOM05D003511 ORTHO05D004403 3.3e-137 491.9 280 80.7
Gorai.008G022200 Gossypium raimondii HOM05D003511 ORTHO05D004403 9.7e-137 490.3 280 79.6
Potri.001G299000 Populus trichocarpa HOM05D003511 ORTHO05D004403 1.3e-136 490.0 280 80.7
Gohir.D12G021900 Gossypium hirsutum HOM05D003511 ORTHO05D004403 2.2e-136 489.2 280 79.3
Ciclev10027816m.g Citrus clementina HOM05D003511 ORTHO05D004403 1.1e-135 486.9 280 78.9
Gohir.A12G021400 Gossypium hirsutum HOM05D003511 ORTHO05D004403 3.1e-135 485.3 280 79.3
CsaV3_3G018140 Cucumis sativus L. HOM05D003511 ORTHO05D004403 4.1e-135 485.0 279 79.2
COL.COLO4_32574 Corchorus olitorius HOM05D003511 ORTHO05D004403 9.0e-135 483.8 280 78.2
Duzib132G0449 Durio zibethinus HOM05D003511 ORTHO05D004403 1.2e-134 483.4 280 79.3
Thecc.02G110900 Theobroma cacao HOM05D003511 ORTHO05D004403 1.2e-134 483.4 280 78.9
CANSAT25G1711 Cannabis sativa HOM05D003511 ORTHO05D004403 2.0e-134 482.6 280 78.6
FAN24G0829 Fragaria x ananassa HOM05D003511 ORTHO05D004403 2.0e-134 482.6 301 76.1
Sabra16G0187700 Salix brachista HOM05D003511 ORTHO05D004403 1.3e-133 479.9 280 79.3
ATR0205G005 Amborella trichopoda HOM05D003511 ORTHO05D004403 6.5e-133 477.6 280 77.1
vmacro02524 Vaccinium macrocarpon HOM05D003511 ORTHO05D004403 6.5e-133 477.6 280 78.2
arahy.Tifrunner.gnm1.ann1.VN0KJM Arachis hypogaea HOM05D003511 ORTHO05D004403 1.1e-132 476.9 280 78.9
FvH4_2g04870 Fragaria vesca HOM05D003511 ORTHO05D004403 1.1e-132 476.9 327 70.6
TWI75G1477 Tripterygium wilfordii HOM05D003511 ORTHO05D004403 4.2e-132 474.9 282 78.4
EL10Ac9g22257 Beta vulgaris HOM05D003511 ORTHO05D004403 5.5e-132 474.6 280 77.1
Cpa.g.sc106.113 Carica papaya HOM05D003511 ORTHO05D004403 5.5e-132 474.6 280 77.9
ECA234G0109 Erigeron canadensis HOM05D003511 ORTHO05D004403 5.5e-132 474.6 280 77.9
Rhsim10G0162100 Rhododendron simsii HOM05D003511 ORTHO05D004403 7.2e-132 474.2 282 77.3
Hund00157 Selenicereus undatus HOM05D003511 ORTHO05D004403 7.2e-132 474.2 280 77.1
Cfa004604 Carpinus fangiana HOM05D003511 ORTHO05D004403 1.6e-131 473.0 280 77.5
MSTRG.20193 Avicennia marina HOM05D003511 ORTHO05D004403 2.1e-131 472.6 280 78.2
Lj5g0008514 Lotus japonicus HOM05D003511 ORTHO05D004403 2.7e-131 472.2 280 75.7
PSO541G1166 Papaver somniferum HOM05D003511 ORTHO05D004403 2.7e-131 472.2 280 77.9
Sed0017826 Sechium edule HOM05D003511 ORTHO05D004403 2.7e-131 472.2 280 76.4
FAN24G2294 Fragaria x ananassa HOM05D003511 ORTHO05D004403 3.6e-131 471.9 328 70.4
Lsat_1_v5_gn_5_116360 Lactuca sativa HOM05D003511 ORTHO05D004403 4.6e-131 471.5 280 76.8
CiPaw.05G013200 Carya illinoinensis HOM05D003511 ORTHO05D004403 7.9e-131 470.7 280 77.9
Medtr1g107135 Medicago truncatula HOM05D003511 ORTHO05D004403 7.9e-131 470.7 280 77.5
AUR62010329 Chenopodium quinoa HOM05D003511 ORTHO05D004403 1.3e-130 469.9 280 77.5
Glyma.10G260900 Glycine max HOM05D003511 ORTHO05D004403 2.3e-130 469.2 280 76.1
Glyma.20G130366 Glycine max HOM05D003511 ORTHO05D004403 3.0e-130 468.8 280 76.1
SalBow6G6056 Salvia bowleyana HOM05D003511 ORTHO05D004403 5.1e-130 468.0 280 78.6
HanXRQChr10g0296941 Helianthus annuus HOM05D003511 ORTHO05D004403 6.7e-130 467.6 280 75.4
Atru.chr5.2453 Acer truncatum HOM05D003511 ORTHO05D004403 8.7e-130 467.2 280 76.1
Lalb_Chr06g0165351 Lupinus albus HOM05D003511 ORTHO05D004403 1.1e-129 466.8 280 75.4
Ciclev10027838m.g Citrus clementina HOM05D003511 ORTHO05D004403 1.9e-129 466.1 280 77.1
Haze_10199 Corylus avellana HOM05D003511 ORTHO05D004403 3.3e-129 465.3 280 76.4
Aa31LG2G16810 Aethionema arabicum HOM05D003511 ORTHO05D004403 4.3e-129 464.9 280 75.0
Sc08g0001330 Simmondsia chinensis HOM05D003511 ORTHO05D004403 4.3e-129 464.9 280 76.4
AUR62039058 Chenopodium quinoa HOM05D003511 ORTHO05D004403 7.4e-129 464.2 280 75.4
Rhsim10G0162400 Rhododendron simsii HOM05D003511 ORTHO05D004403 7.4e-129 464.2 318 69.5
Duzib248G0534 Durio zibethinus HOM05D003511 ORTHO05D004403 9.7e-129 463.8 280 76.1
AUR62039057 Chenopodium quinoa HOM05D003511 ORTHO05D004403 1.7e-128 463.0 280 76.4
AUR62010328 Chenopodium quinoa HOM05D003511 ORTHO05D004403 2.2e-128 462.6 280 75.0
Hund06308 Selenicereus undatus HOM05D003511 ORTHO05D004403 2.2e-128 462.6 280 75.4
VMungo0720G0159 Vigna mungo HOM05D003511 ORTHO05D004403 2.8e-128 462.2 280 75.0
Sabra09G0072100 Salix brachista HOM05D003511 ORTHO05D004403 4.8e-128 461.5 285 71.9
Cc02_g19400 Coffea canephora HOM05D003511 ORTHO05D004403 6.3e-128 461.1 280 75.7
Gohir.D12G021700 Gossypium hirsutum HOM05D003511 ORTHO05D004403 8.2e-128 460.7 280 75.0
Gorai.008G022000 Gossypium raimondii HOM05D003511 ORTHO05D004403 8.2e-128 460.7 280 75.0
Thhalv10024398m.g Eutrema salsugineum HOM05D003511 ORTHO05D004403 1.8e-127 459.5 280 74.3
COL.COLO4_32573 Corchorus olitorius HOM05D003511 ORTHO05D004403 2.4e-127 459.1 280 75.7
Manes.10G075700 Manihot esculenta HOM05D003511 ORTHO05D004403 4.1e-127 458.4 280 75.0
Potri.009G093500 Populus trichocarpa HOM05D003511 ORTHO05D004403 6.9e-127 457.6 280 73.2
Sp7g32040 Schrenkiella parvula HOM05D003511 ORTHO05D004403 9.1e-127 457.2 281 73.7
Thecc.02G111000 Theobroma cacao HOM05D003511 ORTHO05D004403 1.2e-126 456.8 280 74.6
Carub.0007s0611 Capsella rubella HOM05D003511 ORTHO05D004403 1.5e-126 456.4 280 73.9
QL11p032687 Quercus lobata HOM05D003511 ORTHO05D004403 1.5e-126 456.4 280 76.8
Phvul.007G041400 Phaseolus vulgaris HOM05D003511 ORTHO05D004403 2.0e-126 456.1 280 72.9
THA.LOC104819550 Tarenaya hassleriana HOM05D003511 ORTHO05D004403 2.6e-126 455.7 280 75.0
Manes.07G068400 Manihot esculenta HOM05D003511 ORTHO05D004403 4.5e-126 454.9 280 74.3
Gohir.A12G021350 Gossypium hirsutum HOM05D003511 ORTHO05D004403 1.0e-125 453.8 280 74.3
ATR0661G369 Amborella trichopoda HOM05D003511 ORTHO05D004403 1.7e-125 453.0 280 72.9
BcaNung04986 Brassica carinata HOM05D003511 ORTHO05D004403 5.0e-125 451.4 280 72.5
C01p04540 Brassica napus HOM05D003511 ORTHO05D004403 5.0e-125 451.4 280 72.5
BolC1t00439H Brassica oleracea HOM05D003511 ORTHO05D004403 5.0e-125 451.4 280 72.5
BraA01t00406Z Brassica rapa HOM05D003511 ORTHO05D004403 8.5e-125 450.7 280 72.5
AL7G17030 Arabidopsis lyrata HOM05D003511 ORTHO05D004403 1.4e-124 449.9 280 72.9
A01p04170 Brassica napus HOM05D003511 ORTHO05D004403 1.9e-124 449.5 280 72.1
AT4G34260 Arabidopsis thaliana HOM05D003511 ORTHO05D004403 3.2e-124 448.7 280 73.2
Glyma.20G130432 Glycine max HOM05D003511 ORTHO05D004403 3.2e-124 448.7 280 72.9
BcaNung04164 Brassica carinata HOM05D003511 ORTHO05D004403 4.2e-124 448.4 280 72.1
DCAR_029092 Daucus carota HOM05D003511 ORTHO05D004403 4.2e-124 448.4 280 76.1
CARHR242530 Cardamine hirsuta HOM05D003511 ORTHO05D004403 5.5e-124 448.0 280 72.1
Ca_11061_v3 Cicer arietinum L. HOM05D003511 ORTHO05D004403 7.2e-124 447.6 280 73.2
Eucgr.I01092 Eucalyptus grandis HOM05D003511 ORTHO05D004403 7.2e-124 447.6 280 75.0
Atru.chr5.2456 Acer truncatum HOM05D003511 ORTHO05D004403 9.4e-124 447.2 281 76.2
HPP92_006064 Vanilla planifolia HOM05D003511 ORTHO05D004403 2.7e-123 445.7 280 71.8
Os10g0339600 Oryza sativa ssp. japonica HOM05D003511 ORTHO05D004403 1.0e-122 443.7 280 72.9
Eucgr.I01091 Eucalyptus grandis HOM05D003511 ORTHO05D004403 1.8e-122 443.0 280 73.2
TPR.G19061 Trifolium pratense HOM05D003511 ORTHO05D004403 3.9e-122 441.8 281 72.2
Glyma.01G243600 Glycine max HOM05D003511 ORTHO05D004403 7.4e-121 437.6 281 70.8
PGR142G0041 Punica granatum HOM05D003511 ORTHO05D004403 1.3e-120 436.8 280 71.1
Phvul.002G053000 Phaseolus vulgaris HOM05D003511 ORTHO05D004403 2.8e-120 435.6 281 70.5
VMungo1215G0806 Vigna mungo HOM05D003511 ORTHO05D004403 1.1e-119 433.7 281 70.1
Potri.001G298900 Populus trichocarpa HOM05D003511 ORTHO05D004403 1.8e-119 433.0 282 72.0
Sabra16G0187500 Salix brachista HOM05D003511 ORTHO05D004403 9.1e-119 430.6 281 71.5
SEGI_38974 Sequoiadendron giganteum HOM05D003511 ORTHO05D004403 5.9e-118 427.9 280 68.9
arahy.Tifrunner.gnm1.ann1.LFSR1E Arachis hypogaea HOM05D003511 ORTHO05D004403 2.9e-117 425.6 269 74.3
Peaxi162Scf00152g00326 Petunia axillaris HOM05D003511 ORTHO05D004403 2.1e-115 419.5 280 70.0
Os10g0339290 Oryza sativa ssp. japonica HOM05D003511 ORTHO05D004403 6.7e-114 414.5 282 69.1
Medtr4g127370 Medicago truncatula HOM05D003511 ORTHO05D004403 6.3e-112 407.9 266 71.8
Dinv15773 Davidia involucrata HOM05D003511 ORTHO05D004403 1.4e-111 406.8 215 87.0
CDE06G2550 Ceratophyllum demersum HOM05D003511 ORTHO05D004403 1.0e-109 400.6 280 68.6
MBI16_g09476_MAGBIO Magnolia biondii HOM05D003511 ORTHO05D004403 6.1e-107 391.3 228 80.3
MD10G1099400 Malus domestica HOM05D003511 ORTHO05D004403 4.5e-102 375.2 215 80.9
TPR.G19062 Trifolium pratense HOM05D003511 ORTHO05D004403 8.0e-99 364.4 280 60.4
Lj5C215G13 Lonicera japonica HOM05D003511 ORTHO05D004403 5.7e-97 358.2 280 64.6
Pp3c19_10350 Physcomitrium patens HOM05D003511 ORTHO05D004403 5.4e-95 351.7 282 56.4
Psat6g217200 Pisum sativum HOM05D003511 ORTHO05D004403 5.4e-95 351.7 215 75.3
Peaxi162Scf00016g02427 Petunia axillaris HOM05D003511 ORTHO05D004403 5.0e-93 345.1 269 63.9
Mapoly0115s0027 Marchantia polymorpha HOM05D003511 ORTHO05D004403 4.2e-92 342.0 283 56.9
SMO116G0225 Selaginella moellendorffii HOM05D003511 ORTHO05D004403 2.3e-90 336.3 282 55.0
Zm00001eb027590 Zea mays HOM05D003511 ORTHO05D004403 2.0e-89 333.2 217 70.0
SEGI_24031 Sequoiadendron giganteum HOM05D003511 ORTHO05D004403 2.0e-78 296.6 213 64.8
MELO3C019553.2 Cucumis melo HOM05D003511 ORTHO05D004403 6.0e-78 295.0 163 81.0
Sed0023024 Sechium edule HOM05D003511 ORTHO05D004403 1.3e-77 293.9 163 79.1
AagrBONN_evm.TU.Sc2ySwM_344.4246 Anthoceros agrestis HOM05D003511 ORTHO05D004403 3.2e-63 246.1 272 46.0
TAR381G0463 Trochodendron aralioides HOM05D003511 ORTHO05D004403 3.9e-61 239.2 121 86.8
Atru.chr5.2448 Acer truncatum HOM05D003511 ORTHO05D004403 3.2e-55 219.5 280 43.9
TAR381G0671 Trochodendron aralioides HOM05D003511 ORTHO05D004403 3.5e-54 216.1 121 82.6
Ah.01g010970 Amaranthus hybridus HOM05D003511 ORTHO05D004403 1.4e-50 204.1 118 77.1
AagrBONN_evm.TU.Sc2ySwM_344.4259 Anthoceros agrestis HOM05D003511 ORTHO05D004403 1.3e-35 154.5 148 50.7
TPR.G13230 Trifolium pratense HOM05D003511 ORTHO05D004403 2.4e-34 150.2 107 67.3
MBI16_g16349_MAGBIO Magnolia biondii HOM05D003511 ORTHO05D004403 3.4e-25 119.8 53 92.5
MBI16_g33969_MAGBIO Magnolia biondii HOM05D003511 ORTHO05D004403 3.4e-25 119.8 53 92.5
TAR365G0577 Trochodendron aralioides HOM05D003511 ORTHO05D416054 2.2e-19 100.5 64 73.4
TPR.G4920 Trifolium pratense HOM05D000048 ORTHO05D000207 1.0e-16 91.7 64 73.4
Glyma.04G111966 Glycine max HOM05D003511 ORTHO05D004403 1.1e-15 88.2 41 85.4
MD10G1099600 Malus domestica HOM05D003511 ORTHO05D022111 1.8e-13 80.9 39 92.3
Glyma.10G260750 Glycine max HOM05D003511 ORTHO05D004403 1.2e-09 68.2 81 43.2
Rhsim12G0174700 Rhododendron simsii HOM05D003511 ORTHO05D000006 4.5e-09 66.2 54 63.0
Lj5g0016794 Lotus japonicus HOM05D003511 ORTHO05D236221 5.0e-08 62.8 39 64.1
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.6e-06 57.8 46 65.2


User provided reference genes

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