Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.9e-303 1042.7 500 100.0
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.9e-302 1039.3 500 99.6
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.3e-301 1036.2 500 99.2
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.4e-300 1033.5 500 99.0
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-297 1025.0 500 98.2
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.8e-295 1018.5 500 97.6
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-295 1017.7 500 97.6
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.6e-294 1013.1 500 97.2
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.6e-294 1013.1 500 97.0
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.3e-293 1012.3 500 97.2
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.4e-293 1010.0 500 96.8
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.1e-292 1009.2 500 96.8
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.2e-292 1006.1 500 96.2
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 7.2e-212 740.7 500 70.6
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.2e-211 740.0 509 69.9
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 5.9e-206 721.1 499 69.7
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 1.0e-205 720.3 502 68.1
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 6.8e-202 707.6 493 69.0
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 8.9e-202 707.2 498 68.1
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 1.2e-201 706.8 501 69.3
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 7.0e-199 697.6 479 68.9
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 7.0e-199 697.6 474 69.4
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 4.6e-198 694.9 504 68.5
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 1.5e-196 689.9 470 68.7
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 2.8e-195 685.6 501 66.3
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 3.6e-195 685.3 498 65.1
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 2.3e-194 682.6 497 66.2
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 7.5e-193 677.6 499 65.7
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.3e-189 666.8 503 65.0
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 6.6e-189 664.5 497 65.0
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 6.6e-189 664.5 509 64.4
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 9.5e-188 660.6 402 76.1
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 4.7e-187 658.3 496 63.9
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 9.9e-185 650.6 404 74.8
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 4.9e-184 648.3 502 63.7
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 8.3e-184 647.5 500 61.8
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 1.4e-183 646.7 400 74.5
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 1.9e-183 646.4 400 74.5
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 2.4e-183 646.0 404 76.2
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 3.2e-183 645.6 360 80.8
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 3.2e-183 645.6 492 65.0
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 4.1e-183 645.2 400 75.0
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 7.8e-182 641.0 495 63.2
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 1.0e-181 640.6 502 62.5
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 1.7e-181 639.8 479 64.5
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 3.0e-181 639.0 411 72.3
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 3.0e-181 639.0 398 74.6
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 3.9e-181 638.6 496 62.9
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 3.9e-181 638.6 425 70.4
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 6.6e-181 637.9 500 62.4
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.5e-180 636.7 499 62.1
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 4.3e-180 635.2 494 63.0
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 2.8e-179 632.5 499 62.7
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 4.7e-179 631.7 501 62.7
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 4.0e-178 628.6 501 61.5
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 4.0e-178 628.6 501 61.3
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 5.2e-178 628.2 400 73.0
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 8.9e-178 627.5 405 70.4
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 8.9e-178 627.5 501 62.7
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 9.9e-177 624.0 479 63.9
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 1.3e-176 623.6 500 60.0
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 6.4e-176 621.3 507 60.7
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 6.4e-176 621.3 495 59.6
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 1.4e-175 620.2 472 64.0
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 7.1e-175 617.8 378 73.3
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 4.6e-174 615.1 487 62.4
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 1.0e-173 614.0 350 82.6
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 1.3e-173 613.6 494 61.5
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 1.3e-173 613.6 400 71.2
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 1.7e-173 613.2 400 70.0
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 3.3e-172 609.0 401 70.8
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 1.6e-171 606.7 487 61.8
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 2.8e-171 605.9 402 69.7
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 3.6e-171 605.5 396 71.5
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 6.2e-171 604.7 400 70.0
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 9.0e-170 600.9 502 60.0
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 2.6e-169 599.4 393 71.2
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 4.9e-168 595.1 506 59.1
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 2.4e-167 592.8 370 73.2
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 4.2e-167 592.0 403 67.7
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 1.2e-161 573.9 499 56.7
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 1.1e-159 567.4 372 70.2
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 9.3e-159 564.3 359 72.4
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 3.5e-158 562.4 443 60.5
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.5e-156 557.0 430 62.6
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 1.8e-154 550.1 391 65.5
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 1.8e-154 550.1 510 55.1
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 1.0e-152 544.3 508 54.7
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 1.3e-149 533.9 459 57.7
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 1.8e-149 533.5 478 57.7
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 2.3e-149 533.1 350 69.1
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 2.0e-129 466.8 386 58.5
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 2.0e-129 466.8 391 57.0
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 3.3e-124 449.5 293 72.4
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 9.4e-119 431.4 477 50.3
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 1.0e-117 427.9 353 59.5
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 2.3e-109 400.2 407 49.1
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 9.5e-95 351.7 296 57.1
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.4e-90 337.8 209 74.2
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 3.1e-85 320.1 433 39.5
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 3.5e-81 306.6 442 39.4
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 1.2e-70 271.6 445 36.9
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.4e-66 258.1 302 45.7
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 5.6e-63 246.1 399 38.3
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 2.4e-61 240.7 162 69.1
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 9.9e-44 182.2 217 47.5
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 4.6e-41 173.3 322 31.4
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 6.9e-29 132.9 314 31.8
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.5e-28 131.7 100 66.0
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 2.5e-23 114.4 297 29.0
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 3.8e-19 100.5 73 64.4
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 2.5e-15 87.8 59 62.7
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 5.5e-10 70.1 97 39.2


User provided reference genes

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