Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 5.1e-196 687.6 353 100.0
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 2.4e-108 396.4 280 77.1
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 3.4e-107 392.5 282 77.3
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 6.5e-66 255.4 288 56.9
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 4.0e-63 246.1 287 54.0
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 1.2e-62 244.6 284 54.6
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 4.2e-57 226.1 286 50.3
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 5.5e-57 225.7 283 50.2
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 8.0e-56 221.9 283 51.2
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 3.5e-51 206.5 285 44.6
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 4.5e-51 206.1 287 46.3
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 5.9e-51 205.7 291 44.7
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 1.3e-50 204.5 286 45.8
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 2.9e-50 203.4 289 45.7
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 3.8e-50 203.0 289 44.3
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 1.1e-49 201.4 288 46.2
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 1.5e-49 201.1 286 40.9
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 1.2e-48 198.0 284 45.8
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 1.4e-47 194.5 324 42.0
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 4.0e-47 193.0 285 44.6
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 6.8e-47 192.2 285 45.3
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 1.2e-46 191.4 285 44.2
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 4.4e-46 189.5 330 41.5
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 1.7e-45 187.6 286 42.0
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 2.8e-45 186.8 296 44.9
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 4.9e-45 186.0 291 41.9
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 1.1e-44 184.9 283 45.6
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 2.4e-44 183.7 327 41.9
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 2.4e-44 183.7 294 43.2
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 7.0e-44 182.2 285 43.5
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 1.2e-43 181.4 288 41.0
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 3.5e-43 179.9 323 38.4
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 3.5e-43 179.9 283 42.4
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 5.9e-43 179.1 280 37.5
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 7.8e-43 178.7 279 44.4
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 1.0e-42 178.3 283 42.0
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 1.3e-42 177.9 284 40.1
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 1.3e-42 177.9 284 40.1
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 3.8e-42 176.4 285 41.1
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 6.6e-42 175.6 285 41.4
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 1.1e-41 174.9 286 40.6
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 5.6e-41 172.6 301 37.9
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 7.3e-41 172.2 285 42.1
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 9.5e-41 171.8 283 38.5
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 1.2e-40 171.4 285 40.0
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 2.1e-40 170.6 286 39.9
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 8.0e-40 168.7 292 40.8
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 1.4e-39 167.9 286 39.2
Hund07732 Selenicereus undatus HOM05D007438 ORTHO05D009395 3.0e-39 166.8 283 39.9
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 4.0e-39 166.4 302 37.4
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 8.9e-39 165.2 285 40.0
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 2.6e-38 163.7 285 40.0
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 3.4e-38 163.3 283 39.6
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 5.7e-38 162.5 283 41.0
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 5.7e-38 162.5 283 38.9
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 1.3e-37 161.4 290 40.0
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 8.3e-37 158.7 233 46.4
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 1.4e-36 157.9 292 39.0
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 1.8e-36 157.5 284 37.0
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 4.1e-36 156.4 301 36.5
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 2.0e-35 154.1 274 39.8
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 2.7e-35 153.7 284 38.0
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 2.7e-35 153.7 287 39.0
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 4.6e-35 152.9 289 39.8
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 1.0e-34 151.8 284 38.4
Prupe.3G108500 Prunus persica HOM05D007438 ORTHO05D009395 3.0e-34 150.2 232 43.5
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 4.3e-33 146.4 283 37.1
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 4.7e-32 142.9 289 31.8
Sp1g05220 Schrenkiella parvula HOM05D007438 ORTHO05D009395 1.8e-31 141.0 292 36.3
THA.LOC104800831 Tarenaya hassleriana HOM05D007438 ORTHO05D009395 1.8e-31 141.0 289 36.0
BcaB02g06796 Brassica carinata HOM05D007438 ORTHO05D009395 4.4e-30 136.3 310 34.8
C05p04710 Brassica napus HOM05D007438 ORTHO05D009395 9.8e-30 135.2 302 33.8
BolC5t29243H Brassica oleracea HOM05D007438 ORTHO05D009395 1.7e-29 134.4 308 33.4
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 2.9e-29 133.7 284 33.5
CARHR006070 Cardamine hirsuta HOM05D007438 ORTHO05D009395 3.7e-29 133.3 283 34.6
Carub.0001s0582 Capsella rubella HOM05D007438 ORTHO05D009395 4.9e-29 132.9 300 33.3
A10p05120 Brassica napus HOM05D007438 ORTHO05D009395 1.9e-28 131.0 290 33.4
AL1G16470 Arabidopsis lyrata HOM05D007438 ORTHO05D009395 5.4e-28 129.4 282 34.0
BraA10t42777Z Brassica rapa HOM05D007438 ORTHO05D009395 7.0e-28 129.0 304 32.9
AT1G06460 Arabidopsis thaliana HOM05D007438 ORTHO05D009395 1.2e-27 128.3 325 32.9
BraA08t35504Z Brassica rapa HOM05D007438 ORTHO05D009395 3.5e-27 126.7 313 32.9
Phvul.008G264700 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 1.3e-26 124.8 285 33.0
BolC8t47053H Brassica oleracea HOM05D007438 ORTHO05D009395 8.6e-26 122.1 289 34.3
C08p02600 Brassica napus HOM05D007438 ORTHO05D009395 1.1e-25 121.7 274 34.7
Aa31LG1G7510 Aethionema arabicum HOM05D007438 ORTHO05D009395 1.5e-25 121.3 300 34.3
ATR0127G021 Amborella trichopoda HOM05D007438 ORTHO05D009395 1.2e-24 118.2 245 35.9
BcaB03g13417 Brassica carinata HOM05D000181 ORTHO05D002783 1.2e-22 111.7 283 32.9
Nitab4.5_0005259g0040 Nicotiana tabacum HOM05D007438 ORTHO05D009395 4.4e-22 109.8 252 35.7
HPP92_021771 Vanilla planifolia HOM05D007438 ORTHO05D009395 1.3e-21 108.2 279 31.9
A08p35960 Brassica napus HOM05D007438 ORTHO05D009395 1.7e-21 107.8 283 31.1
Thhalv10008353m.g Eutrema salsugineum HOM05D007438 ORTHO05D009395 2.2e-21 107.5 243 35.8
arahy.Tifrunner.gnm1.ann1.AN6F3M Arachis hypogaea HOM05D007438 ORTHO05D009395 1.9e-20 104.4 207 34.3
Sc21g0004320 Simmondsia chinensis HOM05D007438 ORTHO05D009395 1.9e-20 104.4 138 46.4
Nitab4.5_0011473g0010 Nicotiana tabacum HOM05D007438 ORTHO05D009395 2.4e-20 104.0 109 52.3
Sc21g0004330 Simmondsia chinensis HOM05D007438 ORTHO05D009395 1.2e-19 101.7 90 55.6
SMO111G0151 Selaginella moellendorffii HOM05D007438 ORTHO05D009395 4.7e-16 89.7 218 32.1
HanXRQChr17g0565881 Helianthus annuus HOM05D007438 ORTHO05D009395 3.1e-15 87.0 123 48.0
Mapoly0109s0048 Marchantia polymorpha HOM05D007438 ORTHO05D009395 1.2e-14 85.1 308 28.6
BcaC07g36810 Brassica carinata HOM05D000181 ORTHO05D002783 5.8e-14 82.8 236 30.5
SalBow8G2019 Salvia bowleyana HOM05D007438 ORTHO05D009395 7.6e-14 82.4 122 45.1
arahy.Tifrunner.gnm1.ann1.28WURV Arachis hypogaea HOM05D007438 ORTHO05D009395 1.9e-12 77.8 74 54.1
Phvul.003G195300 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 2.4e-12 77.4 173 36.4
Haze_13451 Corylus avellana HOM05D007438 ORTHO05D009395 9.2e-12 75.5 94 56.4
Pp3c2_23860 Physcomitrium patens HOM05D007438 ORTHO05D009395 2.6e-06 57.4 230 28.7


User provided reference genes

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