Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035455 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 0.0e+00 2250.3 1161 100.0
CSS0006949 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 0.0e+00 1799.6 1039 91.1
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 7.9e-302 1040.8 1191 55.5
Actinidia25123 Actinidia chinensis HOM05D005457 ORTHO05D006350 5.7e-276 954.9 1088 53.6
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 1.1e-274 950.7 1137 52.9
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 2.5e-263 912.9 1200 50.1
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 2.5e-263 912.9 1200 50.1
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 2.5e-263 912.9 1200 50.1
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 8.0e-254 881.3 1131 51.1
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 2.0e-220 770.4 1207 45.4
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 2.2e-203 713.8 749 56.6
Actinidia08557 Actinidia chinensis HOM05D005457 ORTHO05D006350 2.0e-172 610.9 720 51.5
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 4.5e-172 609.8 1216 40.0
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 2.4e-165 587.4 1204 40.8
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 6.1e-161 572.8 1316 38.0
Lj2A1073T53 Lonicera japonica HOM05D005457 ORTHO05D006350 1.3e-150 538.5 1183 39.5
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 1.5e-148 531.6 1190 38.5
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 1.8e-144 518.1 1165 37.9
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 5.3e-141 506.5 1160 36.9
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 2.5e-138 497.7 1150 38.2
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 4.2e-138 496.9 1157 38.1
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 8.0e-129 466.1 1167 37.4
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 1.4e-125 455.3 1291 35.3
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 3.5e-124 450.7 1310 35.2
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 1.2e-121 442.2 1134 35.2
Potri.009G040500 Populus trichocarpa HOM05D005457 ORTHO05D006350 4.6e-116 423.7 1190 35.6
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 1.5e-114 418.7 1161 35.0
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 2.8e-113 414.5 1137 33.4
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 8.0e-113 412.9 1188 34.3
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 1.8e-112 411.8 1154 34.5
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.5e-111 408.7 1189 34.1
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 9.8e-111 406.0 1209 34.7
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 3.2e-109 401.0 1140 33.6
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 1.2e-108 399.1 1172 33.9
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.6e-108 397.1 1169 33.6
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 1.1e-106 392.5 1211 34.4
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 2.5e-106 391.3 1108 33.5
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 1.6e-105 388.7 1157 34.1
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 8.1e-105 386.3 1174 34.0
MELO3C020581.2 Cucumis melo HOM05D005457 ORTHO05D006350 2.3e-104 384.8 1198 34.1
MBI14_g32923_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 2.3e-104 384.8 1235 32.2
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.1e-101 374.0 1174 32.9
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.7e-100 371.3 1146 32.8
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 2.7e-100 371.3 1161 34.8
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 4.6e-100 370.5 1158 32.9
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 2.3e-99 368.2 1187 32.2
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 9.5e-98 362.8 1180 32.8
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 1.5e-95 355.5 1213 33.0
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 1.3e-94 352.4 1150 32.0
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 4.9e-94 350.5 1152 31.7
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 1.1e-93 349.4 1159 33.0
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 2.4e-93 348.2 1137 32.2
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 1.6e-89 335.5 1173 30.2
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 3.4e-87 327.8 1015 32.8
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 7.6e-87 326.6 1194 31.2
PGSC0003DMG400006701 Solanum tuberosum HOM05D005457 ORTHO05D006350 9.9e-87 326.2 1153 31.7
AUR62020069 Chenopodium quinoa HOM05D005457 ORTHO05D006350 3.5e-84 317.8 1149 31.0
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 1.8e-80 305.4 1158 31.8
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 2.4e-80 305.1 1150 29.5
TAR623G0390 Trochodendron aralioides HOM05D005457 ORTHO05D006350 4.2e-77 294.3 729 36.2
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 1.2e-76 292.7 1152 30.5
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 6.0e-76 290.4 1060 31.9
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 4.8e-73 280.8 1153 29.7
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 1.4e-72 279.3 1139 29.8
Eucgr.B02283 Eucalyptus grandis HOM05D005457 ORTHO05D006350 2.4e-69 268.5 1194 31.2
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 7.4e-66 256.9 1167 30.1
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 1.3e-65 256.1 1140 30.2
RcHm_v2.0_Chr5g0067361 Rosa chinensis HOM05D005457 ORTHO05D006350 1.1e-64 253.1 447 43.6
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 1.5e-63 249.2 1139 28.9
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 1.7e-62 245.7 1139 29.4
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 2.2e-62 245.4 1156 28.1
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 8.4e-62 243.4 1145 28.2
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 3.2e-61 241.5 1144 29.8
TAR623G1322 Trochodendron aralioides HOM05D005457 ORTHO05D006350 3.2e-61 241.5 495 40.8
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 5.5e-61 240.7 688 32.0
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 3.5e-60 238.0 1151 29.0
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 7.9e-60 236.9 1160 29.7
Cpa.g.sc112.90 Carica papaya HOM05D005457 ORTHO05D006350 1.8e-59 235.7 768 32.6
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 3.4e-55 221.5 769 35.1
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 8.4e-54 216.9 807 31.6
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 5.5e-53 214.2 1088 25.3
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 6.3e-49 200.7 771 31.3
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 4.1e-48 198.0 1131 28.2
Nitab4.5_0000752g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 5.3e-48 197.6 886 31.3
Oeu017421.1 Olea europaea HOM05D005457 ORTHO05D006350 6.9e-48 197.2 585 31.6
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 4.2e-45 188.0 553 32.9
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 1.2e-44 186.4 730 31.1
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 4.6e-44 184.5 1132 27.2
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 1.8e-43 182.6 562 34.0
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 3.9e-43 181.4 725 32.3
Manes.01G166000 Manihot esculenta HOM05D005457 ORTHO05D006350 2.0e-42 179.1 424 38.9
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 3.4e-39 168.3 561 34.6
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 2.1e-36 159.1 334 39.2
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 7.9e-36 157.1 664 31.6
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 1.5e-34 152.9 1175 24.6
Prupe.6G064700 Prunus persica HOM05D005457 ORTHO05D006350 9.7e-34 150.2 397 35.8
Duzib170G0589 Durio zibethinus HOM05D005457 ORTHO05D006350 8.5e-30 137.1 347 34.9
Cpa.g.sc112.91 Carica papaya HOM05D005457 ORTHO05D006350 3.5e-23 115.2 121 47.1
CDE09G0768 Ceratophyllum demersum HOM05D005457 ORTHO05D006350 1.0e-22 113.6 127 50.4
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 1.1e-21 110.2 208 43.8
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 1.1e-21 110.2 284 35.2
CDE02G3816 Ceratophyllum demersum HOM05D034644 ORTHO05D006350 1.3e-17 96.7 674 25.2
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 5.9e-15 87.8 1285 24.1
unitig_27.g24810 Utricularia gibba HOM05D005457 ORTHO05D006350 2.2e-14 85.9 263 30.0
Oeu002456.1 Olea europaea HOM05D005457 ORTHO05D006350 2.5e-13 82.4 255 34.5
Psat0s560g0120 Pisum sativum HOM05D005457 ORTHO05D006350 1.1e-08 67.0 191 31.4
Psat2g109120 Pisum sativum HOM05D005457 ORTHO05D006350 3.1e-08 65.5 224 28.6
Os12g0155300 Oryza sativa ssp. japonica HOM05D005457 ORTHO05D006350 5.9e-07 61.2 116 34.5
Duzib170G0080 Durio zibethinus HOM05D005457 ORTHO05D006350 2.3e-06 59.3 531 26.6
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 5.0e-06 58.2 107 35.5


User provided reference genes

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