Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035449 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 2.2e-108 395.6 194 100.0
CSS0007117 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.7e-76 289.7 200 76.5
CSS0031995 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 4.7e-74 281.6 194 74.7
CSS0032086 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D000921 2.2e-71 272.7 179 77.7
CSS0034290 Camellia sinensis var. sinensis HOM05D008473 ORTHO05D000921 1.7e-68 263.1 174 76.4
CSS0033827 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D000921 2.6e-64 249.2 179 72.1
CSS0006884 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.7e-60 236.5 181 66.3
CSS0023692 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 6.8e-49 198.0 194 57.7
CSS0011559 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.6e-48 196.1 194 58.8
CSS0042299 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 3.7e-47 192.2 194 55.7
Dinv11570 Davidia involucrata HOM05D008473 ORTHO05D000921 7.1e-22 108.2 197 36.0
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.1e-19 100.9 191 34.0
Dinv10275 Davidia involucrata HOM05D008473 ORTHO05D000921 3.6e-18 95.9 183 35.5
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 4.7e-18 95.5 191 33.5
Dinv20245 Davidia involucrata HOM05D008473 ORTHO05D000921 2.4e-17 93.2 187 32.6
Dinv10828 Davidia involucrata HOM05D008473 ORTHO05D000921 4.0e-17 92.4 167 36.5
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 1.9e-14 83.6 204 29.9
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 2.4e-14 83.2 204 29.4
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 2.4e-14 83.2 204 29.4
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 1.2e-13 80.9 204 29.4
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 2.7e-13 79.7 207 24.6
CSS0041232 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 6.0e-13 78.6 64 54.7
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 3.9e-12 75.9 74 48.6
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 5.1e-12 75.5 206 25.2
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 5.1e-12 75.5 189 32.3
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 6.6e-12 75.1 204 28.9
Lju1319C4G9 Lonicera japonica HOM05D008338 ORTHO05D000921 8.7e-12 74.7 190 30.5
CANSAT35G0983 Cannabis sativa HOM05D003171 ORTHO05D000921 1.5e-11 73.9 74 47.3
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 1.5e-11 73.9 175 33.1
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.5e-11 73.9 204 28.4
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 2.5e-11 73.2 204 27.9
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.5e-11 73.2 197 29.4
PSO675G2453 Papaver somniferum HOM05D003171 ORTHO05D000921 3.3e-11 72.8 70 45.7
CSS0009593 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 4.3e-11 72.4 146 34.2
Dinv11893 Davidia involucrata HOM05D007209 ORTHO05D000921 5.6e-11 72.0 201 25.9
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 5.6e-11 72.0 95 41.1
Lj1A366G18 Lonicera japonica HOM05D008338 ORTHO05D000921 5.6e-11 72.0 190 30.0
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 7.3e-11 71.6 193 28.5
Dinv06146 Davidia involucrata HOM05D003171 ORTHO05D000921 1.6e-10 70.5 62 51.6
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 2.1e-10 70.1 184 26.1
Lj7A726T26 Lonicera japonica HOM05D008338 ORTHO05D000921 2.1e-10 70.1 191 29.3
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 3.6e-10 69.3 198 28.3
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 4.8e-10 68.9 206 24.3
Lju1040A2T29 Lonicera japonica HOM05D008338 ORTHO05D000921 6.2e-10 68.6 195 29.2
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 1.1e-09 67.8 202 27.2
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 1.1e-09 67.8 202 27.2
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 1.4e-09 67.4 179 25.1
Ca_02097_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 1.4e-09 67.4 200 26.5
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 1.8e-09 67.0 76 35.5
Ca_19984_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 2.4e-09 66.6 188 25.5
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 2.4e-09 66.6 201 22.9
CSS0044845 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.1e-09 66.2 195 29.7
CSS0039380 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.0e-09 65.9 207 28.5
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 5.3e-09 65.5 83 38.6
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 9.0e-09 64.7 89 39.3
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 1.2e-08 64.3 186 26.9
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 1.2e-08 64.3 89 39.3
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 1.2e-08 64.3 89 39.3
CSS0009426 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-08 63.9 204 28.4
CSS0038075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-08 63.9 205 28.3
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 1.5e-08 63.9 88 35.2
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 2.0e-08 63.5 195 25.1
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 2.0e-08 63.5 198 24.7
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 2.0e-08 63.5 89 39.3
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 2.0e-08 63.5 89 39.3
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 2.0e-08 63.5 89 39.3
CSS0010680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.6e-08 63.2 186 30.6
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 3.4e-08 62.8 89 39.3
Atru.chr8.561 Acer truncatum HOM05D000034 ORTHO05D000037 4.5e-08 62.4 106 35.8
Lj4A464T6 Lonicera japonica HOM05D008338 ORTHO05D000921 4.5e-08 62.4 60 50.0
Lj2A1212T63 Lonicera japonica HOM05D008338 ORTHO05D000921 5.8e-08 62.0 185 29.2
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 7.6e-08 61.6 76 34.2
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 7.6e-08 61.6 201 25.4
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 7.6e-08 61.6 209 25.4
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 7.6e-08 61.6 195 28.7
FAN11G3401 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.3e-07 60.8 74 36.5
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 1.3e-07 60.8 206 29.1
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 1.3e-07 60.8 87 39.1
Lj5A412T16 Lonicera japonica HOM05D008338 ORTHO05D000921 1.7e-07 60.5 195 27.7
Lj7A78G56 Lonicera japonica HOM05D008338 ORTHO05D000921 1.7e-07 60.5 192 28.1
PGR031G3762 Punica granatum HOM05D003171 ORTHO05D000921 1.7e-07 60.5 203 25.6
CSS0040342 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-07 59.7 191 29.3
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 2.9e-07 59.7 201 23.9
Lj7A576T77 Lonicera japonica HOM05D008338 ORTHO05D000921 2.9e-07 59.7 60 50.0
PGR031G1431 Punica granatum HOM05D003171 ORTHO05D000921 2.9e-07 59.7 205 25.9
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 3.8e-07 59.3 191 28.3
Lj4C727T6 Lonicera japonica HOM05D008338 ORTHO05D000921 3.8e-07 59.3 195 27.7
Lj7A613T70 Lonicera japonica HOM05D008338 ORTHO05D000921 3.8e-07 59.3 58 51.7
PGR004G0260 Punica granatum HOM05D003171 ORTHO05D000921 3.8e-07 59.3 203 25.1
PGR142G2636 Punica granatum HOM05D003171 ORTHO05D000921 3.8e-07 59.3 203 25.1
PGR142G1171 Punica granatum HOM05D003171 ORTHO05D000921 4.9e-07 58.9 85 36.5
Rhsim07G0029700 Rhododendron simsii HOM05D020286 ORTHO05D000921 4.9e-07 58.9 77 40.3
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 6.4e-07 58.5 200 24.5
PGR004G1433 Punica granatum HOM05D003171 ORTHO05D000921 6.4e-07 58.5 203 24.6
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 1.1e-06 57.8 195 28.2
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.1e-06 57.8 198 25.3
PGR142G3043 Punica granatum HOM05D003171 ORTHO05D000921 1.1e-06 57.8 203 25.1
Cfa005675 Carpinus fangiana HOM05D011725 ORTHO05D016914 1.4e-06 57.4 197 23.9
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 1.4e-06 57.4 74 36.5
PGR031G2473 Punica granatum HOM05D003171 ORTHO05D000921 1.4e-06 57.4 203 24.6
PGR042G0562 Punica granatum HOM05D003171 ORTHO05D000921 1.4e-06 57.4 202 26.2
QL10p054458 Quercus lobata HOM05D003171 ORTHO05D000921 1.4e-06 57.4 206 25.2
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 1.9e-06 57.0 206 25.2
PGR142G1768 Punica granatum HOM05D003171 ORTHO05D000921 2.4e-06 56.6 203 25.6
Rhsim01G0169400 Rhododendron simsii HOM05D020286 ORTHO05D000921 2.4e-06 56.6 77 40.3
Lj1A889T103 Lonicera japonica HOM05D008338 ORTHO05D000921 4.2e-06 55.8 152 30.3
Oeu025535.3 Olea europaea HOM05D000622 ORTHO05D000475 5.4e-06 55.5 183 26.8
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 7.1e-06 55.1 185 24.3
Dinv07352 Davidia involucrata HOM05D008473 ORTHO05D000921 9.3e-06 54.7 86 37.2
Dinv34380 Davidia involucrata HOM05D008473 ORTHO05D000921 9.3e-06 54.7 117 29.1
vmacro04060 Vaccinium macrocarpon HOM05D000495 ORTHO05D000357 9.3e-06 54.7 194 28.4


User provided reference genes

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