Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.6e-74 282.7 150 100.0
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 2.5e-43 179.1 148 70.9
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.6e-42 176.4 152 69.7
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.8e-41 172.9 151 66.2
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 5.3e-41 171.4 106 88.7
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 4.5e-40 168.3 148 68.2
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.8e-39 165.2 120 77.5
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 5.4e-38 161.4 129 71.3
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 5.4e-38 161.4 152 65.1
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 2.7e-37 159.1 149 65.1
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 2.7e-37 159.1 153 65.4
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 1.3e-36 156.8 122 73.8
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.8e-36 156.4 148 65.5
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 2.3e-36 156.0 151 62.9
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.9e-36 155.2 95 88.4
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 6.7e-36 154.5 156 60.9
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 8.7e-36 154.1 158 62.0
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 8.7e-36 154.1 141 65.2
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.1e-35 153.7 152 63.2
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.1e-35 153.7 152 62.5
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 1.5e-35 153.3 150 66.0
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 1.9e-35 152.9 151 60.9
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.9e-35 152.9 120 70.8
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.3e-35 152.1 120 70.0
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 5.6e-35 151.4 152 61.8
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 7.4e-35 151.0 157 62.4
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 7.4e-35 151.0 136 67.6
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.3e-34 150.2 157 63.1
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.3e-34 150.2 148 61.5
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 2.1e-34 149.4 152 61.8
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 2.8e-34 149.1 149 61.1
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 3.7e-34 148.7 152 61.8
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 3.7e-34 148.7 120 69.2
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 4.8e-34 148.3 121 71.9
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.8e-33 146.4 152 61.8
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 2.4e-33 146.0 145 62.8
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 3.1e-33 145.6 126 69.0
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 3.1e-33 145.6 148 62.8
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 4.0e-33 145.2 155 61.9
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 4.0e-33 145.2 147 63.3
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 5.3e-33 144.8 154 63.0
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 6.9e-33 144.4 151 60.9
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 6.9e-33 144.4 148 62.2
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 6.9e-33 144.4 151 60.9
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 9.0e-33 144.1 121 70.2
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 1.2e-32 143.7 151 64.2
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.2e-32 143.7 146 63.0
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 1.5e-32 143.3 151 64.2
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 2.0e-32 142.9 148 62.8
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 2.0e-32 142.9 150 63.3
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 2.6e-32 142.5 132 66.7
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 2.6e-32 142.5 150 57.3
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.4e-32 142.1 148 62.2
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.4e-32 142.1 146 62.3
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.4e-32 142.1 146 62.3
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 4.5e-32 141.7 139 64.0
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 5.8e-32 141.4 137 61.3
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 5.8e-32 141.4 148 62.2
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 9.9e-32 140.6 145 58.6
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 9.9e-32 140.6 157 59.9
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.3e-31 140.2 110 71.8
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 1.3e-31 140.2 130 66.2
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 1.3e-31 140.2 146 60.3
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 1.7e-31 139.8 145 60.0
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.7e-31 139.8 130 66.2
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 2.2e-31 139.4 130 62.3
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 2.2e-31 139.4 154 61.7
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 2.2e-31 139.4 154 61.7
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 2.9e-31 139.0 143 61.5
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 2.9e-31 139.0 154 61.7
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 2.9e-31 139.0 147 62.6
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 3.8e-31 138.7 134 61.9
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 3.8e-31 138.7 134 61.9
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 3.8e-31 138.7 109 69.7
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.9e-31 138.3 146 61.6
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 6.4e-31 137.9 126 67.5
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 6.4e-31 137.9 148 62.2
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 6.4e-31 137.9 119 68.1
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 8.4e-31 137.5 134 61.9
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 8.4e-31 137.5 130 66.9
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 1.1e-30 137.1 113 66.4
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 1.1e-30 137.1 122 69.7
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.4e-30 136.7 109 67.9
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.4e-30 136.7 134 60.4
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.4e-30 136.7 134 60.4
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.4e-30 136.7 144 62.5
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.9e-30 136.3 137 59.9
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 1.9e-30 136.3 155 57.4
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.9e-30 136.3 122 66.4
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 4.2e-30 135.2 156 57.7
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 4.2e-30 135.2 134 60.4
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 4.2e-30 135.2 150 56.0
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 4.2e-30 135.2 150 56.0
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 4.2e-30 135.2 152 58.6
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 7.1e-30 134.4 150 60.7
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 1.2e-29 133.7 130 62.3
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 2.1e-29 132.9 148 58.8
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.0e-28 130.6 128 60.9
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 5.1e-28 128.3 77 85.7
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 6.7e-28 127.9 152 56.6
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 1.9e-27 126.3 81 79.0
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 1.9e-27 126.3 151 56.3
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 5.6e-27 124.8 156 52.6
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 7.4e-27 124.4 134 59.7
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.1e-26 122.9 124 62.9
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 6.9e-25 117.9 149 53.7
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.5e-24 116.7 128 58.6
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.7e-23 113.2 67 86.6
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.7e-23 113.2 67 86.6
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 4.2e-22 108.6 92 67.4
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 1.6e-21 106.7 117 63.2
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.3e-20 103.6 145 49.7
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 1.8e-20 103.2 70 77.1
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.5e-19 100.1 225 38.2
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 1.9e-19 99.8 78 69.2
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 7.4e-19 97.8 120 55.0
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 2.2e-18 96.3 85 58.8
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 4.8e-18 95.1 120 50.0
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.1e-17 94.0 130 51.5
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.0e-12 75.9 62 66.1
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 1.4e-09 67.0 111 46.8
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 3.1e-09 65.9 60 65.0
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 5.3e-09 65.1 79 48.1
vmacro10856 Vaccinium macrocarpon HOM05D001438 ORTHO05D001336 4.5e-08 62.0 84 50.0
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 4.5e-08 62.0 48 77.1
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 1.7e-07 60.1 63 49.2
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 5.0e-07 58.5 93 47.3


User provided reference genes

Program Settings