Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035414 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.3e-87 326.2 150 100.0
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 2.5e-22 109.4 83 63.9
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 8.7e-20 100.9 65 70.8
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 7.4e-19 97.8 78 59.0
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 2.6e-16 89.4 65 56.9
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 3.4e-16 89.0 65 60.0
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 7.6e-16 87.8 65 56.9
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 5.0e-15 85.1 83 53.0
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 6.5e-15 84.7 89 46.1
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 1.4e-14 83.6 106 39.6
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 1.9e-14 83.2 67 56.7
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 3.2e-14 82.4 83 47.0
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 4.2e-14 82.0 65 56.9
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 4.2e-14 82.0 84 47.6
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 7.2e-14 81.3 65 55.4
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 1.2e-13 80.5 65 53.8
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 1.2e-13 80.5 83 48.2
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 1.6e-13 80.1 83 48.2
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 2.1e-13 79.7 97 41.2
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 2.7e-13 79.3 57 63.2
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 2.7e-13 79.3 65 53.8
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 3.6e-13 79.0 65 55.4
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 3.6e-13 79.0 65 56.9
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 4.6e-13 78.6 65 50.8
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 4.6e-13 78.6 65 55.4
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 4.6e-13 78.6 78 48.7
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 6.1e-13 78.2 65 55.4
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 1.0e-12 77.4 65 52.3
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 1.8e-12 76.6 65 50.8
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.8e-12 76.6 84 44.0
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 2.3e-12 76.3 66 50.0
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 3.0e-12 75.9 86 45.3
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 3.9e-12 75.5 65 50.8
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 5.1e-12 75.1 65 52.3
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 5.1e-12 75.1 65 52.3
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 5.1e-12 75.1 83 48.2
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 6.7e-12 74.7 65 50.8
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 1.5e-11 73.6 83 44.6
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.9e-11 73.2 65 50.8
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 2.5e-11 72.8 65 52.3
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 2.5e-11 72.8 83 47.0
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 2.5e-11 72.8 65 52.3
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 7.4e-11 71.2 65 50.8
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 7.4e-11 71.2 65 50.8
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 7.4e-11 71.2 65 49.2
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 9.7e-11 70.9 64 46.9
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 9.7e-11 70.9 68 50.0
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 9.7e-11 70.9 65 50.8
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 2.2e-10 69.7 92 37.0
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 2.2e-10 69.7 83 45.8
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 2.8e-10 69.3 57 50.9
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 6.3e-10 68.2 75 45.3
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 8.2e-10 67.8 55 49.1
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 8.2e-10 67.8 78 41.0
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 1.1e-09 67.4 75 49.3
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 1.4e-09 67.0 70 45.7
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 5.3e-09 65.1 70 44.3
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 5.3e-09 65.1 67 47.8
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 1.2e-08 63.9 53 56.6
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 2.0e-08 63.2 70 47.1
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 2.0e-08 63.2 84 39.3
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 4.5e-08 62.0 70 41.4
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 4.5e-08 62.0 75 41.3
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 5.9e-08 61.6 83 42.2
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 7.7e-08 61.2 70 42.9
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 7.7e-08 61.2 75 41.3
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 2.2e-07 59.7 65 46.2
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 3.8e-07 58.9 75 40.0
AL4G34560 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 1.9e-06 56.6 57 47.4
SEGI_01774 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 4.2e-06 55.5 69 42.0
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 5.5e-06 55.1 75 44.0


User provided reference genes

Program Settings