Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035371 Camellia sinensis var. sinensis HOM05D006306 ORTHO05D007912 1.7e-84 315.8 147 100.0
CSS0007539 Camellia sinensis var. sinensis HOM05D006306 ORTHO05D007912 3.8e-68 261.5 147 84.4
RhsimUnG0097700 Rhododendron simsii HOM05D006306 ORTHO05D007912 3.5e-37 158.7 148 56.8
Rhsim03G0195700 Rhododendron simsii HOM05D006306 ORTHO05D007912 5.0e-36 154.8 144 56.9
CiPaw.06G005500 Carya illinoinensis HOM05D006306 ORTHO05D007912 6.5e-28 127.9 144 45.8
TAR636G3656 Trochodendron aralioides HOM05D006306 ORTHO05D007912 5.5e-27 124.8 153 43.1
Atru.chr1.326 Acer truncatum HOM05D006306 ORTHO05D007912 9.4e-27 124.0 140 47.1
Hma1.2p1_0142F.1_g064400 Hydrangea macrophylla HOM05D006306 ORTHO05D007912 3.6e-26 122.1 136 48.5
CANSAT21G1468 Cannabis sativa HOM05D006306 ORTHO05D007912 4.7e-26 121.7 109 51.4
Ciclev10005526m.g Citrus clementina HOM05D006306 ORTHO05D007912 8.0e-26 120.9 140 45.7
Cfa016324 Carpinus fangiana HOM05D006306 ORTHO05D007912 1.8e-25 119.8 144 43.8
Gorai.008G272800 Gossypium raimondii HOM05D006306 ORTHO05D007912 1.8e-25 119.8 139 46.8
Gohir.A12G254499 Gossypium hirsutum HOM05D006306 ORTHO05D007912 4.0e-25 118.6 134 48.5
Haze_00077 Corylus avellana HOM05D000147 ORTHO05D002016 5.2e-25 118.2 120 49.2
COL.COLO4_30262 Corchorus olitorius HOM05D006306 ORTHO05D007912 1.2e-24 117.1 141 44.0
Duzib084G0050 Durio zibethinus HOM05D006306 ORTHO05D007912 2.6e-24 115.9 143 46.2
Peaxi162Scf00057g00026 Petunia axillaris HOM05D006306 ORTHO05D007912 1.7e-23 113.2 123 48.0
Hma1.2p1_0142F.1_g064410 Hydrangea macrophylla HOM05D006306 ORTHO05D007912 4.1e-22 108.6 103 52.4
GSVIVG01028794001 Vitis vinifera HOM05D006306 ORTHO05D007912 5.4e-22 108.2 139 41.0
Lj1A1009G47 Lonicera japonica HOM05D006306 ORTHO05D007912 2.0e-21 106.3 140 45.0
Nn1g01725 Nelumbo nucifera HOM05D006306 ORTHO05D007912 3.8e-20 102.1 91 52.7
Sed0005488 Sechium edule HOM05D006306 ORTHO05D007912 5.0e-20 101.7 100 48.0
MBI06_g33547_MAGBIO Magnolia biondii HOM05D006306 ORTHO05D007912 1.1e-19 100.5 145 39.3
TWI39G0038 Tripterygium wilfordii HOM05D006306 ORTHO05D007912 1.9e-19 99.8 140 37.1
Migut.F00264 Erythranthe guttata HOM05D006306 ORTHO05D007912 2.5e-19 99.4 143 39.2
Solyc03g007750.3 Solanum lycopersicum HOM05D006306 ORTHO05D007912 1.2e-18 97.1 108 50.0
Sopen03g003670 Solanum pennellii HOM05D006306 ORTHO05D007912 1.2e-18 97.1 108 50.0
Nitab4.5_0001748g0060 Nicotiana tabacum HOM05D006306 ORTHO05D007912 3.6e-18 95.5 107 47.7
CsaV3_5G000970 Cucumis sativus L. HOM05D006306 ORTHO05D007912 4.7e-18 95.1 116 41.4
MD01G1211200 Malus domestica HOM05D006306 ORTHO05D007912 8.0e-18 94.4 111 44.1
Lj5g0016065 Lotus japonicus HOM05D006306 ORTHO05D007912 1.0e-17 94.0 119 37.0
Prupe.2G303600 Prunus persica HOM05D006306 ORTHO05D007912 1.0e-17 94.0 141 37.6
Cpa.g.sc3.9 Carica papaya HOM05D006306 ORTHO05D007912 1.4e-17 93.6 142 38.0
Psat6g195200 Pisum sativum HOM05D006306 ORTHO05D007912 1.4e-17 93.6 102 47.1
ClCG01G000830 Citrullus lanatus HOM05D006306 ORTHO05D007912 2.3e-17 92.8 99 45.5
QL09p012095 Quercus lobata HOM05D006306 ORTHO05D007912 4.0e-17 92.0 138 39.9
THA.LOC104825120 Tarenaya hassleriana HOM05D006306 ORTHO05D007912 6.8e-17 91.3 134 37.3
Aqoxy5G04066 Aquilegia oxysepala HOM05D006306 ORTHO05D007912 8.9e-17 90.9 95 47.4
MSTRG.27066 Avicennia marina HOM05D006306 ORTHO05D007912 1.2e-16 90.5 141 37.6
Sp6g15040 Schrenkiella parvula HOM05D006306 ORTHO05D007912 1.5e-16 90.1 125 38.4
PGSC0003DMG400019962 Solanum tuberosum HOM05D006306 ORTHO05D007912 1.5e-16 90.1 106 44.3
Ca_10706_v3 Cicer arietinum L. HOM05D006306 ORTHO05D007912 3.4e-16 89.0 117 39.3
Hund11704 Selenicereus undatus HOM05D006306 ORTHO05D007912 3.4e-16 89.0 130 39.2
VMungo0720G2617 Vigna mungo HOM05D006306 ORTHO05D007912 5.7e-16 88.2 135 38.5
Eucgr.K00302 Eucalyptus grandis HOM05D006306 ORTHO05D007912 9.8e-16 87.4 125 39.2
Sc19g0001030 Simmondsia chinensis HOM05D006306 ORTHO05D007912 9.8e-16 87.4 139 36.0
Sabra12G0024000 Salix brachista HOM05D006306 ORTHO05D007912 1.3e-15 87.0 137 40.1
PSO170G4684 Papaver somniferum HOM05D006306 ORTHO05D007912 1.7e-15 86.7 139 36.7
Potri.012G035500 Populus trichocarpa HOM05D006306 ORTHO05D007912 1.7e-15 86.7 137 39.4
AUR62021081 Chenopodium quinoa HOM05D006306 ORTHO05D007912 3.7e-15 85.5 139 36.0
SGA_v2.0_scaffold192G40609 Striga asiatica HOM05D006306 ORTHO05D007912 4.9e-15 85.1 117 41.9
Carub.0008s1304 Capsella rubella HOM05D006306 ORTHO05D007912 6.3e-15 84.7 112 38.4
Nitab4.5_0008026g0020 Nicotiana tabacum HOM05D006306 ORTHO05D007912 6.3e-15 84.7 101 46.5
RcHm_v2.0_Chr1g0379511 Rosa chinensis HOM05D006306 ORTHO05D007912 6.3e-15 84.7 118 40.7
PSO063G5557 Papaver somniferum HOM05D006306 ORTHO05D007912 1.4e-14 83.6 139 36.7
CAN.G926.4 Capsicum annuum HOM05D006306 ORTHO05D007912 1.8e-14 83.2 103 44.7
AT5G52880 Arabidopsis thaliana HOM05D006306 ORTHO05D007912 2.4e-14 82.8 117 37.6
Thhalv10014697m.g Eutrema salsugineum HOM05D006306 ORTHO05D007912 3.1e-14 82.4 115 37.4
Glyma.10G229500 Glycine max HOM05D006306 ORTHO05D007912 3.1e-14 82.4 122 36.9
unitig_92.g28262 Utricularia gibba HOM05D006306 ORTHO05D001071 4.1e-14 82.0 105 42.9
AL8G27340 Arabidopsis lyrata HOM05D006306 ORTHO05D007912 1.2e-13 80.5 113 38.9
FAN01G1106 Fragaria x ananassa HOM05D006306 ORTHO05D007912 2.7e-13 79.3 112 39.3
TPR.G7772 Trifolium pratense HOM05D006306 ORTHO05D007912 2.7e-13 79.3 116 37.9
BcaC04g20532 Brassica carinata HOM05D006306 ORTHO05D007912 3.5e-13 79.0 114 36.8
C09p42490 Brassica napus HOM05D006306 ORTHO05D007912 3.5e-13 79.0 114 36.8
BolC9t57127H Brassica oleracea HOM05D006306 ORTHO05D007912 3.5e-13 79.0 114 36.8
AUR62031450 Chenopodium quinoa HOM05D006306 ORTHO05D007912 3.5e-13 79.0 127 37.0
Cc02_g02170 Coffea canephora HOM05D006306 ORTHO05D007912 3.5e-13 79.0 103 38.8
FvH4_7g30600 Fragaria vesca HOM05D006306 ORTHO05D007912 3.5e-13 79.0 112 39.3
FAN06G4689 Fragaria x ananassa HOM05D006306 ORTHO05D007912 3.5e-13 79.0 112 39.3
FAN10G3235 Fragaria x ananassa HOM05D006306 ORTHO05D007912 3.5e-13 79.0 112 40.2
CARHR265820 Cardamine hirsuta HOM05D006306 ORTHO05D007912 1.3e-12 77.0 113 37.2
PGR142G3937 Punica granatum HOM05D006306 ORTHO05D007912 1.3e-12 77.0 106 38.7
vmacro06599 Vaccinium macrocarpon HOM05D006306 ORTHO05D007912 2.3e-12 76.3 146 36.3
RcHm_v2.0_Chr1g0379501 Rosa chinensis HOM05D006306 ORTHO05D007912 3.8e-12 75.5 130 35.4
FAN06G4805 Fragaria x ananassa HOM05D006306 ORTHO05D007912 6.6e-12 74.7 112 38.4
arahy.Tifrunner.gnm1.ann1.FS5X82 Arachis hypogaea HOM05D006306 ORTHO05D007912 1.9e-11 73.2 133 31.6
arahy.Tifrunner.gnm1.ann1.U1BTLB Arachis hypogaea HOM05D006306 ORTHO05D007912 2.5e-11 72.8 133 31.6
Lsat_1_v5_gn_8_6341 Lactuca sativa HOM05D006306 ORTHO05D007912 4.3e-11 72.0 140 39.3
MBI17_g41518_MAGBIO Magnolia biondii HOM05D006306 ORTHO05D007912 5.6e-11 71.6 145 32.4
CAN.G926.5 Capsicum annuum HOM05D006306 ORTHO05D007912 7.3e-11 71.2 88 44.3
Lalb_Chr02g0141321 Lupinus albus HOM05D006306 ORTHO05D007912 7.3e-11 71.2 68 42.6
Phvul.007G076000 Phaseolus vulgaris HOM05D006306 ORTHO05D007912 7.3e-11 71.2 94 38.3
ECA233G3199 Erigeron canadensis HOM05D006306 ORTHO05D007912 2.1e-10 69.7 120 35.8
HanXRQChr05g0141161 Helianthus annuus HOM05D006306 ORTHO05D007912 2.1e-10 69.7 122 41.8
SalBow4G0206 Salvia bowleyana HOM05D006306 ORTHO05D007912 2.3e-09 66.2 140 32.1
FAN10G1990 Fragaria x ananassa HOM05D006306 ORTHO05D007912 3.1e-09 65.9 83 39.8
ATR1131G020 Amborella trichopoda HOM05D006306 ORTHO05D007912 4.4e-08 62.0 111 28.8
HPP92_009775 Vanilla planifolia HOM05D006306 ORTHO05D007912 7.5e-08 61.2 79 35.4
Aa31LG3G9120 Aethionema arabicum HOM05D006306 ORTHO05D007912 9.8e-08 60.8 96 30.2
CDE08G0346 Ceratophyllum demersum HOM05D006306 ORTHO05D007912 1.7e-07 60.1 85 40.0
Aa31LG3G9130 Aethionema arabicum HOM05D006306 ORTHO05D007912 2.9e-07 59.3 109 28.4
Medtr1g099490 Medicago truncatula HOM05D006306 ORTHO05D007912 4.9e-07 58.5 168 26.2
RcHm_v2.0_Chr1g0378761 Rosa chinensis HOM05D006306 ORTHO05D007912 1.1e-06 57.4 54 48.1


User provided reference genes

Program Settings