Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035329 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D028392 1.8e-57 225.7 112 100.0
Dinv16438 Davidia involucrata HOM05D000317 ORTHO05D000032 2.1e-34 149.1 91 82.4
Actinidia37477 Actinidia chinensis HOM05D000317 ORTHO05D000032 2.5e-27 125.6 96 74.0
Rhsim09G0081700 Rhododendron simsii HOM05D000317 ORTHO05D000032 1.6e-21 106.3 99 68.7
QL03p040909 Quercus lobata HOM05D000317 ORTHO05D000032 6.5e-20 100.9 94 60.6
GSVIVG01000606001 Vitis vinifera HOM05D000317 ORTHO05D000032 1.9e-19 99.4 95 61.1
DCAR_023529 Daucus carota HOM05D000084 ORTHO05D000032 1.2e-18 96.7 93 53.8
Peaxi162Scf00025g00312 Petunia axillaris HOM05D000317 ORTHO05D000032 1.2e-18 96.7 91 63.7
Cc11_g04980 Coffea canephora HOM05D000317 ORTHO05D000032 8.0e-18 94.0 98 58.2
QL03p040539 Quercus lobata HOM05D000317 ORTHO05D000032 1.0e-17 93.6 94 56.4
Potri.008G142000 Populus trichocarpa HOM05D000317 ORTHO05D000032 2.0e-16 89.4 98 56.1
Sabra10G0072300 Salix brachista HOM05D000317 ORTHO05D000032 2.0e-16 89.4 102 52.0
vmacro10763 Vaccinium macrocarpon HOM05D000317 ORTHO05D000032 5.7e-16 87.8 93 59.1
CSS0027037 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D028392 1.3e-15 86.7 119 51.3
Nitab4.5_0001777g0040 Nicotiana tabacum HOM05D000317 ORTHO05D000032 1.7e-15 86.3 101 60.4
Potri.010G099600 Populus trichocarpa HOM05D000317 ORTHO05D000032 1.7e-15 86.3 97 53.6
Manes.17G091800 Manihot esculenta HOM05D000317 ORTHO05D000032 2.2e-15 85.9 80 63.8
TAR622G0919 Trochodendron aralioides HOM05D000317 ORTHO05D000032 2.2e-15 85.9 109 50.5
Sabra08G0107600 Salix brachista HOM05D000317 ORTHO05D000032 4.1e-14 81.6 98 51.0
Duzib248G0583 Durio zibethinus HOM05D000317 ORTHO05D000032 7.0e-14 80.9 74 62.2
CiPaw.05G161200 Carya illinoinensis HOM05D000317 ORTHO05D000032 1.2e-13 80.1 71 66.2
Ciclev10005466m.g Citrus clementina HOM05D000317 ORTHO05D000032 1.6e-13 79.7 76 61.8
MD13G1013200 Malus domestica HOM05D000317 ORTHO05D000032 1.6e-13 79.7 70 62.9
DCAR_002636 Daucus carota HOM05D000317 ORTHO05D000032 3.5e-13 78.6 95 53.7
Thecc.02G300000 Theobroma cacao HOM05D000317 ORTHO05D000032 7.7e-13 77.4 77 58.4
DCAR_030321 Daucus carota HOM05D000317 ORTHO05D000032 5.0e-12 74.7 93 49.5
Duzib268G1562 Durio zibethinus HOM05D000317 ORTHO05D000032 5.0e-12 74.7 88 55.7
Cpa.g.sc2.82 Carica papaya HOM05D000317 ORTHO05D000032 3.2e-11 72.0 93 52.7
Nitab4.5_0003889g0040 Nicotiana tabacum HOM05D000317 ORTHO05D000032 3.2e-11 72.0 99 51.5
Oeu024848.1 Olea europaea HOM05D000317 ORTHO05D000032 3.2e-11 72.0 104 48.1
ECA233G4531 Erigeron canadensis HOM05D000317 ORTHO05D000032 4.2e-11 71.6 111 45.0
Nn4g24770 Nelumbo nucifera HOM05D000317 ORTHO05D000032 4.2e-11 71.6 99 52.5
Nitab4.5_0000129g0510 Nicotiana tabacum HOM05D000317 ORTHO05D000032 4.2e-11 71.6 101 52.5
Cfa015090 Carpinus fangiana HOM05D000317 ORTHO05D000032 5.5e-11 71.2 72 63.9
TWI77G0222 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 7.2e-11 70.9 97 50.5
TWI77G0745 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 7.2e-11 70.9 97 50.5
TWI74G0155 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 1.2e-10 70.1 95 48.4
Oeu044062.2 Olea europaea HOM05D000317 ORTHO05D000032 1.6e-10 69.7 103 42.7
Lalb_Chr02g0143361 Lupinus albus HOM05D000317 ORTHO05D028392 4.7e-10 68.2 78 51.3
Duzib251G0747 Durio zibethinus HOM05D000317 ORTHO05D000032 1.8e-09 66.2 73 56.2
Haze_10733 Corylus avellana HOM05D000317 ORTHO05D000032 2.3e-09 65.9 71 57.7
Sopen04g003630 Solanum pennellii HOM05D000317 ORTHO05D000032 2.3e-09 65.9 96 50.0
Eucgr.B02627 Eucalyptus grandis HOM05D000317 ORTHO05D000032 4.0e-09 65.1 97 49.5
Gorai.002G169300 Gossypium raimondii HOM05D000317 ORTHO05D000032 5.2e-09 64.7 69 59.4
ECA234G1750 Erigeron canadensis HOM05D000317 ORTHO05D000032 6.8e-09 64.3 73 57.5
Phvul.007G019900 Phaseolus vulgaris HOM05D000317 ORTHO05D000032 6.8e-09 64.3 80 50.0
Nitab4.5_0000944g0120 Nicotiana tabacum HOM05D000317 ORTHO05D000032 1.2e-08 63.5 101 50.5
CANSAT78G1920 Cannabis sativa HOM05D000317 ORTHO05D000032 1.5e-08 63.2 84 51.2
Aqoxy3G04164 Aquilegia oxysepala HOM05D000317 ORTHO05D000032 2.6e-08 62.4 97 48.5
TAR629G0688 Trochodendron aralioides HOM05D000317 ORTHO05D000032 2.6e-08 62.4 78 59.0
Gohir.A01G144100 Gossypium hirsutum HOM05D000317 ORTHO05D000032 3.4e-08 62.0 70 60.0
Gohir.D01G136600 Gossypium hirsutum HOM05D000317 ORTHO05D000032 3.4e-08 62.0 70 60.0
FAN17G2130 Fragaria x ananassa HOM05D000317 ORTHO05D000032 4.4e-08 61.6 80 46.2
MD16G1010100 Malus domestica HOM05D000317 ORTHO05D000032 5.7e-08 61.2 73 54.8
FAN22G0751 Fragaria x ananassa HOM05D000317 ORTHO05D000032 7.5e-08 60.8 80 46.2
Lalb_Chr10g0095241 Lupinus albus HOM05D000317 ORTHO05D028392 7.5e-08 60.8 78 46.2
Solyc04g008480.2 Solanum lycopersicum HOM05D000317 ORTHO05D000032 9.8e-08 60.5 96 47.9
Lsat_1_v5_gn_4_21660 Lactuca sativa HOM05D000317 ORTHO05D000032 1.3e-07 60.1 77 50.6
PSO063G2944 Papaver somniferum HOM05D000317 ORTHO05D000032 1.7e-07 59.7 71 56.3
PSO782G0078 Papaver somniferum HOM05D000317 ORTHO05D000032 1.7e-07 59.7 71 56.3
VMungo1215G1217 Vigna mungo HOM05D000317 ORTHO05D000032 3.7e-07 58.5 100 42.0
Lj5g0012013 Lotus japonicus HOM05D000317 ORTHO05D000032 6.3e-07 57.8 49 59.2
Atru.chr11.1032 Acer truncatum HOM05D000317 ORTHO05D000032 8.3e-07 57.4 74 55.4
FvH4_4g35980 Fragaria vesca HOM05D000317 ORTHO05D000032 8.3e-07 57.4 80 45.0
FAN12G3657 Fragaria x ananassa HOM05D000317 ORTHO05D000032 8.3e-07 57.4 80 45.0
Lalb_Chr06g0163591 Lupinus albus HOM05D000317 ORTHO05D000032 1.8e-06 56.2 98 40.8
Phvul.003G008400 Phaseolus vulgaris HOM05D000317 ORTHO05D000032 2.4e-06 55.8 101 39.6
SGA_v2.0_scaffold127G33992 Striga asiatica HOM05D000317 ORTHO05D000032 3.1e-06 55.5 70 51.4
MSTRG.13654 Avicennia marina HOM05D000317 ORTHO05D000032 4.1e-06 55.1 86 48.8
Peaxi162Scf00705g00001 Petunia axillaris HOM05D000317 ORTHO05D000032 4.1e-06 55.1 94 45.7
THA.LOC104824103 Tarenaya hassleriana HOM05D000317 ORTHO05D000032 4.1e-06 55.1 64 56.2
Manes.15G140900 Manihot esculenta HOM05D000317 ORTHO05D000032 5.4e-06 54.7 43 67.4


User provided reference genes

Program Settings