Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.7e-301 1038.5 500 100.0
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-300 1034.6 500 99.6
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.4e-300 1033.5 500 99.4
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.1e-300 1033.1 500 99.4
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.7e-299 1031.2 500 99.2
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.0e-298 1029.2 500 99.0
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-297 1025.4 500 98.8
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.7e-296 1020.4 500 98.2
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.1e-295 1019.2 500 97.6
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.4e-294 1013.8 500 97.4
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.9e-293 1011.1 500 97.2
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.8e-293 1010.7 500 97.2
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.2e-291 1005.7 500 97.0
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 2.5e-212 742.3 500 70.8
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.2e-209 733.4 509 69.7
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 9.2e-207 723.8 499 69.9
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 3.8e-205 718.4 502 68.7
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 3.6e-203 711.8 498 68.9
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 2.0e-201 706.1 499 69.3
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 6.4e-200 701.0 493 69.0
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 8.3e-200 700.7 474 70.5
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 2.0e-198 696.0 479 69.3
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 2.7e-198 695.7 504 68.7
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 4.3e-196 688.3 470 69.1
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 6.2e-195 684.5 499 66.7
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 1.4e-194 683.3 498 65.5
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 5.2e-194 681.4 500 66.6
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 1.2e-193 680.2 497 66.4
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 5.1e-189 664.8 497 65.4
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 7.3e-188 661.0 402 76.6
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 9.5e-188 660.6 503 65.0
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 2.6e-185 652.5 502 64.5
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 3.4e-185 652.1 496 63.9
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.3e-184 650.2 509 63.7
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 2.2e-184 649.4 502 63.5
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 3.7e-184 648.7 500 62.2
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 1.9e-183 646.4 360 81.4
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 2.4e-183 646.0 485 65.8
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 2.4e-183 646.0 400 75.2
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 1.2e-182 643.7 400 74.0
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 1.2e-182 643.7 404 74.5
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 2.1e-182 642.9 489 64.8
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 2.1e-182 642.9 400 74.5
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 2.7e-182 642.5 404 76.5
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.0e-181 640.6 496 63.7
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 3.0e-181 639.0 496 63.3
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 3.0e-181 639.0 415 71.6
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 5.1e-181 638.3 499 62.7
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 8.6e-181 637.5 500 63.6
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 3.3e-180 635.6 498 63.5
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 3.3e-180 635.6 487 63.9
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 4.3e-180 635.2 500 62.8
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 2.8e-179 632.5 398 74.6
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.8e-178 629.8 409 71.9
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 4.0e-178 628.6 507 61.5
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 2.0e-177 626.3 501 62.7
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 7.6e-177 624.4 405 70.4
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 1.3e-176 623.6 479 64.3
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 1.3e-176 623.6 501 61.3
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 2.9e-176 622.5 501 61.3
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 3.8e-176 622.1 500 60.2
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 3.2e-175 619.0 492 62.6
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 4.2e-175 618.6 493 61.7
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 9.2e-175 617.5 378 73.8
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 1.2e-174 617.1 400 72.2
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 1.6e-174 616.7 487 62.8
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 1.3e-173 613.6 493 59.2
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 1.7e-173 613.2 400 70.2
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 6.6e-173 611.3 350 82.9
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 1.1e-172 610.5 487 62.2
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 5.6e-172 608.2 400 71.0
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 2.8e-171 605.9 400 70.5
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 4.7e-171 605.1 402 70.1
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 6.2e-171 604.7 401 70.8
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 3.1e-170 602.4 506 59.9
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 6.9e-170 601.3 396 71.5
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 1.5e-169 600.1 393 72.0
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 9.9e-169 597.4 502 60.4
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 1.6e-166 590.1 403 68.0
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 4.6e-166 588.6 370 73.2
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 8.7e-165 584.3 499 57.7
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 1.6e-158 563.5 372 70.2
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 2.7e-158 562.8 443 60.9
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 7.9e-158 561.2 359 72.1
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 3.9e-157 558.9 478 58.6
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.1e-156 557.4 430 62.6
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 3.7e-155 552.4 391 66.0
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 5.8e-153 545.0 480 56.5
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 6.0e-150 535.0 458 57.2
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 3.9e-149 532.3 488 57.0
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 3.9e-149 532.3 350 69.7
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 6.9e-130 468.4 391 57.5
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 2.6e-129 466.5 386 58.8
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 2.0e-124 450.3 293 73.0
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 8.0e-118 428.3 353 59.8
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 2.3e-117 426.8 477 50.3
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 6.8e-109 398.7 407 49.4
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 1.9e-95 354.0 296 56.8
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 2.9e-91 340.1 209 75.1
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 3.6e-86 323.2 433 40.4
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 3.2e-82 310.1 443 39.3
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 3.0e-72 276.9 447 37.1
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 3.9e-64 250.0 302 44.7
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 9.6e-63 245.4 400 37.5
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 1.8e-61 241.1 162 69.8
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 1.9e-42 177.9 192 50.0
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 4.6e-41 173.3 322 31.1
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.5e-28 131.7 308 32.1
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.3e-27 128.6 89 69.7
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 1.9e-23 114.8 295 29.2
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 2.5e-18 97.8 73 64.4
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 6.7e-16 89.7 59 64.4
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 5.5e-10 70.1 89 40.4


User provided reference genes

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