Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 5.8e-36 153.7 77 100.0
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 1.5e-31 139.0 77 83.1
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 3.3e-31 137.9 77 85.7
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 3.3e-31 137.9 77 85.7
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 1.3e-30 136.0 74 86.5
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 4.8e-30 134.0 72 86.1
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 3.1e-29 131.3 73 87.7
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 3.1e-29 131.3 77 79.2
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 6.9e-29 130.2 76 82.9
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 6.9e-29 130.2 77 81.8
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 6.9e-29 130.2 77 80.5
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 9.0e-29 129.8 76 80.3
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.2e-28 129.4 77 80.5
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 1.2e-28 129.4 74 79.7
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.5e-28 129.0 74 81.1
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 1.5e-28 129.0 74 81.1
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 2.0e-28 128.6 74 78.4
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 2.0e-28 128.6 71 80.3
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 2.0e-28 128.6 74 79.7
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 2.0e-28 128.6 74 79.7
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 2.0e-28 128.6 74 79.7
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 1.0e-27 126.3 77 79.2
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 1.0e-27 126.3 74 81.1
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.0e-27 126.3 74 77.0
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 1.3e-27 125.9 74 81.1
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 1.3e-27 125.9 74 77.0
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 1.3e-27 125.9 77 76.6
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 1.7e-27 125.6 75 77.3
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 1.7e-27 125.6 77 75.3
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 2.2e-27 125.2 77 75.3
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 2.9e-27 124.8 74 79.7
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 2.9e-27 124.8 77 75.3
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 2.9e-27 124.8 77 79.2
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 2.9e-27 124.8 75 78.7
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 2.9e-27 124.8 77 75.3
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 2.9e-27 124.8 75 78.7
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 4.9e-27 124.0 74 78.4
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 6.5e-27 123.6 75 77.3
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 6.5e-27 123.6 75 77.3
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 6.5e-27 123.6 75 77.3
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 6.5e-27 123.6 75 76.0
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 8.4e-27 123.2 77 74.0
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 8.4e-27 123.2 74 75.7
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.1e-26 122.9 74 77.0
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 1.1e-26 122.9 74 77.0
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 1.4e-26 122.5 74 75.7
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 1.4e-26 122.5 77 76.6
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 1.4e-26 122.5 74 77.0
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 1.9e-26 122.1 77 75.3
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 1.9e-26 122.1 74 78.4
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 1.9e-26 122.1 75 76.0
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 1.9e-26 122.1 75 76.0
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.9e-26 122.1 75 76.0
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 1.9e-26 122.1 75 77.3
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 3.2e-26 121.3 77 74.0
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 3.2e-26 121.3 77 74.0
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 3.2e-26 121.3 77 74.0
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 4.2e-26 120.9 76 73.7
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 4.2e-26 120.9 66 83.3
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 4.2e-26 120.9 74 77.0
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 7.1e-26 120.2 74 75.7
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 7.1e-26 120.2 74 74.3
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 7.1e-26 120.2 74 75.7
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 9.3e-26 119.8 75 72.0
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 2.1e-25 118.6 72 75.0
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 2.1e-25 118.6 72 75.0
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 2.7e-25 118.2 75 74.7
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 2.7e-25 118.2 75 73.3
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 2.7e-25 118.2 76 72.4
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 3.5e-25 117.9 75 73.3
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 3.5e-25 117.9 74 73.0
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 3.5e-25 117.9 68 80.9
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 4.6e-25 117.5 74 73.0
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 6.0e-25 117.1 75 73.3
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 7.9e-25 116.7 75 72.0
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 7.9e-25 116.7 74 75.7
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 1.3e-24 115.9 74 74.3
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.8e-24 115.5 77 72.7
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 2.3e-24 115.2 74 74.3
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 2.3e-24 115.2 72 75.0
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 2.3e-24 115.2 72 75.0
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 3.0e-24 114.8 77 67.5
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 8.7e-24 113.2 72 73.6
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 8.7e-24 113.2 75 72.0
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 1.1e-23 112.8 72 72.2
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 1.1e-23 112.8 77 71.4
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 2.5e-23 111.7 71 69.0
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 2.5e-23 111.7 72 72.2
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 3.3e-23 111.3 77 70.1
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 4.3e-23 110.9 74 70.3
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 9.6e-23 109.8 72 70.8
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 1.4e-21 105.9 77 66.2
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 6.9e-21 103.6 76 61.8
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 1.5e-20 102.4 75 68.0
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 2.6e-20 101.7 75 66.7
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 2.6e-20 101.7 72 65.3
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 3.4e-20 101.3 70 68.6
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 4.5e-20 100.9 72 63.9
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 4.5e-20 100.9 75 65.3
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 5.9e-20 100.5 104 51.9
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 5.9e-20 100.5 75 65.3
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 1.7e-19 99.0 75 65.3
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 2.2e-19 98.6 72 62.5
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 2.9e-19 98.2 75 62.7
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 7.2e-18 93.6 75 61.3
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 7.9e-17 90.1 68 55.9
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 3.0e-16 88.2 46 87.0
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 2.5e-15 85.1 116 43.1
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 4.3e-15 84.3 66 60.6
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 9.7e-15 83.2 68 52.9
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 1.5e-12 75.9 43 74.4
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 1.3e-11 72.8 44 75.0
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.3e-11 72.8 43 72.1
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 2.9e-11 71.6 62 51.6
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 6.5e-11 70.5 46 67.4
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 2.1e-09 65.5 58 51.7
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 3.6e-09 64.7 35 82.9
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 3.0e-08 61.6 66 45.5
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 6.7e-08 60.5 35 77.1
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 2.6e-07 58.5 43 65.1
CsaV3_2G013260 Cucumis sativus L. HOM05D006636 ORTHO05D008266 4.4e-07 57.8 30 86.7
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 4.8e-06 54.3 41 61.0


User provided reference genes

Program Settings