Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.6e-101 372.9 200 100.0
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-89 333.6 195 90.3
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-89 333.6 195 90.3
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-89 333.6 195 90.3
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.8e-89 332.8 195 89.7
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 9.0e-89 330.5 195 89.7
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 9.0e-89 330.5 195 89.2
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.0e-88 329.3 195 89.2
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 8.2e-82 307.4 195 85.1
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.4e-81 306.6 195 85.1
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 9.4e-54 214.2 195 66.7
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 2.2e-42 176.4 150 66.7
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 1.7e-39 166.8 178 55.1
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 2.3e-39 166.4 127 70.9
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 2.3e-39 166.4 225 52.0
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 3.3e-38 162.5 122 71.3
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.2e-37 160.6 122 71.3
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.1e-37 159.8 107 76.6
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 2.8e-37 159.5 113 73.5
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 4.7e-37 158.7 113 75.2
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 4.7e-37 158.7 174 58.0
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 8.0e-37 157.9 117 71.8
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 2.3e-36 156.4 114 73.7
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 3.0e-36 156.0 110 72.7
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 3.0e-36 156.0 116 69.8
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 8.9e-36 154.5 130 66.2
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.2e-35 154.1 117 70.1
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 3.4e-35 152.5 113 70.8
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 3.4e-35 152.5 113 72.6
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 2.9e-34 149.4 114 71.1
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 6.4e-34 148.3 131 63.4
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 6.4e-34 148.3 131 63.4
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.1e-33 147.5 165 55.8
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 2.4e-33 146.4 131 62.6
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 5.4e-33 145.2 131 58.8
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 2.7e-32 142.9 116 65.5
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 3.5e-32 142.5 131 57.3
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 5.0e-31 138.7 136 58.1
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 9.5e-30 134.4 115 62.6
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 2.1e-29 133.3 115 63.5
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 2.8e-29 132.9 115 62.6
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.4e-28 130.6 137 56.9
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 1.8e-28 130.2 113 60.2
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 3.1e-28 129.4 113 59.3
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 4.0e-28 129.0 126 55.6
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 5.2e-28 128.6 113 59.3
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 5.2e-28 128.6 113 59.3
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 5.2e-28 128.6 113 59.3
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 5.2e-28 128.6 113 59.3
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 5.2e-28 128.6 95 69.5
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 5.2e-28 128.6 126 56.3
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 6.8e-28 128.3 106 63.2
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 8.9e-28 127.9 126 55.6
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 1.2e-27 127.5 113 59.3
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 1.5e-27 127.1 113 59.3
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 4.4e-27 125.6 113 60.2
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 1.3e-26 124.0 113 57.5
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 2.2e-26 123.2 125 55.2
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 4.9e-26 122.1 114 56.1
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 2.4e-25 119.8 111 58.6
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 4.1e-25 119.0 99 63.6
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 9.2e-25 117.9 142 45.1
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 9.2e-25 117.9 142 45.1
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 6.6e-23 111.7 274 34.7
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 4.7e-21 105.5 80 67.5
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 1.8e-20 103.6 63 85.7
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 2.2e-18 96.7 82 62.2
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.4e-17 93.2 56 80.4
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 6.0e-16 88.6 99 48.5
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 2.2e-10 70.1 68 60.3
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 1.6e-08 63.9 78 52.6
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 3.3e-06 56.2 100 41.0


User provided reference genes

Program Settings