Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035175 Camellia sinensis var. sinensis HOM05D000293 ORTHO05D110088 1.3e-81 306.2 141 100.0
RhsimUnG0145400 Rhododendron simsii HOM05D000293 ORTHO05D000180 2.5e-29 132.5 180 43.9
Rhsim03G0089500 Rhododendron simsii HOM05D000293 ORTHO05D000180 2.2e-28 129.4 180 43.3
Actinidia26653 Actinidia chinensis HOM05D000293 ORTHO05D000180 7.4e-21 104.4 187 37.4
Hma1.2p1_0547F.1_g176620 Hydrangea macrophylla HOM05D000293 ORTHO05D000180 2.2e-20 102.8 173 37.6
TAR369G0558 Trochodendron aralioides HOM05D000293 ORTHO05D000180 2.2e-20 102.8 190 36.3
Manes.09G063060 Manihot esculenta HOM05D000293 ORTHO05D000180 1.3e-17 93.6 174 35.1
TAR623G0520 Trochodendron aralioides HOM05D000293 ORTHO05D000180 3.8e-17 92.0 194 33.0
TWI74G1186 Tripterygium wilfordii HOM05D000293 ORTHO05D000180 5.0e-17 91.7 182 31.9
CsaV3_3G036140 Cucumis sativus L. HOM05D000293 ORTHO05D000180 1.9e-16 89.7 186 32.3
ClCG10G019950 Citrullus lanatus HOM05D000293 ORTHO05D000180 3.2e-16 89.0 178 32.0
DCAR_020809 Daucus carota HOM05D000293 ORTHO05D000180 7.2e-16 87.8 161 31.7
Thecc.05G070600 Theobroma cacao HOM05D000293 ORTHO05D000180 1.2e-15 87.0 187 31.0
QL07p042731 Quercus lobata HOM05D000293 ORTHO05D000180 1.6e-15 86.7 185 32.4
Duzib093G1610 Durio zibethinus HOM05D000293 ORTHO05D000180 4.7e-15 85.1 188 29.8
Duzib128G1909 Durio zibethinus HOM05D000293 ORTHO05D000180 7.9e-15 84.3 188 31.9
Eucgr.A01648 Eucalyptus grandis HOM05D000293 ORTHO05D000180 7.9e-15 84.3 163 31.3
Cfa017645 Carpinus fangiana HOM05D000293 ORTHO05D000180 1.0e-14 84.0 190 32.1
MELO3C009376.2 Cucumis melo HOM05D000293 ORTHO05D000180 1.4e-14 83.6 188 31.9
Lj3A989T54 Lonicera japonica HOM05D000293 ORTHO05D000180 1.4e-14 83.6 211 32.2
Nitab4.5_0005019g0040 Nicotiana tabacum HOM05D000293 ORTHO05D000180 3.9e-14 82.0 150 32.0
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 1.5e-13 80.1 157 35.0
MD12G1108400 Malus domestica HOM05D000293 ORTHO05D000180 1.5e-13 80.1 187 29.4
Prupe.7G126800 Prunus persica HOM05D000293 ORTHO05D000180 2.6e-13 79.3 188 29.3
CiPaw.10G128400 Carya illinoinensis HOM05D000293 ORTHO05D000180 7.4e-13 77.8 191 29.3
Sabra06G0096300 Salix brachista HOM05D000293 ORTHO05D000180 1.7e-12 76.6 187 33.2
FAN09G3595 Fragaria x ananassa HOM05D000293 ORTHO05D000180 1.1e-11 73.9 187 30.5
SalBow3G3806 Salvia bowleyana HOM05D000293 ORTHO05D000180 2.4e-11 72.8 152 34.2
FAN02G2274 Fragaria x ananassa HOM05D000293 ORTHO05D000180 4.1e-11 72.0 195 30.3
FvH4_6g16660 Fragaria vesca HOM05D000293 ORTHO05D000180 1.6e-10 70.1 195 29.7
FAN14G1018 Fragaria x ananassa HOM05D000293 ORTHO05D000180 1.6e-10 70.1 195 29.7
Medtr1g062940 Medicago truncatula HOM05D000293 ORTHO05D000180 1.6e-10 70.1 173 29.5
Lj5g0007011 Lotus japonicus HOM05D000293 ORTHO05D000180 2.0e-10 69.7 188 27.7
Nitab4.5_0004195g0050 Nicotiana tabacum HOM05D000008 ORTHO05D000180 2.0e-10 69.7 170 28.2
FAN05G1911 Fragaria x ananassa HOM05D000293 ORTHO05D000180 2.6e-10 69.3 195 29.7
FAN05G4553 Fragaria x ananassa HOM05D000293 ORTHO05D000180 2.6e-10 69.3 195 29.7
Sc20g0005640 Simmondsia chinensis HOM05D000293 ORTHO05D000180 2.6e-10 69.3 197 27.9
Aqoxy1G01119 Aquilegia oxysepala HOM05D000293 ORTHO05D000180 3.5e-10 68.9 182 29.1
Cpa.g.sc92.99 Carica papaya HOM05D000293 ORTHO05D000180 4.5e-10 68.6 188 30.3
Migut.J00446 Erythranthe guttata HOM05D000293 ORTHO05D000180 4.5e-10 68.6 160 30.0
ECA233G1882 Erigeron canadensis HOM05D000293 ORTHO05D000180 1.0e-09 67.4 189 27.5
Potri.006G122100 Populus trichocarpa HOM05D000293 ORTHO05D000180 1.0e-09 67.4 188 31.9
RcHm_v2.0_Chr3g0470621 Rosa chinensis HOM05D000293 ORTHO05D000180 1.0e-09 67.4 195 27.7
Atru.chr8.1761 Acer truncatum HOM05D000293 ORTHO05D000180 1.3e-09 67.0 152 29.6
CSS0026313 Camellia sinensis var. sinensis HOM05D000293 ORTHO05D000180 1.3e-09 67.0 48 68.8
TPR.G21009 Trifolium pratense HOM05D000293 ORTHO05D000180 1.3e-09 67.0 177 28.2
Carub.0005s1973 Capsella rubella HOM05D000293 ORTHO05D000180 1.7e-09 66.6 164 31.7
Gohir.A04G070800 Gossypium hirsutum HOM05D000293 ORTHO05D000180 2.9e-09 65.9 179 27.4
Gorai.009G413600 Gossypium raimondii HOM05D000293 ORTHO05D000180 3.8e-09 65.5 190 30.0
Lsat_1_v5_gn_6_28280 Lactuca sativa HOM05D000293 ORTHO05D000180 5.0e-09 65.1 160 33.1
PGR004G1224 Punica granatum HOM05D000293 ORTHO05D000180 5.0e-09 65.1 187 30.5
Gohir.D04G109500 Gossypium hirsutum HOM05D000293 ORTHO05D000180 8.5e-09 64.3 184 29.3
Glyma.13G145800 Glycine max HOM05D000008 ORTHO05D000180 1.5e-08 63.5 187 28.9
CAN.G488.25 Capsicum annuum HOM05D000293 ORTHO05D000180 2.5e-08 62.8 158 29.1
PSO801G0799 Papaver somniferum HOM05D000293 ORTHO05D000180 5.5e-08 61.6 186 29.0
Solyc10g083900.2 Solanum lycopersicum HOM05D000293 ORTHO05D000180 9.4e-08 60.8 144 27.8
Peaxi162Scf00515g00013 Petunia axillaris HOM05D000293 ORTHO05D000180 1.2e-07 60.5 172 27.9
Haze_20508 Corylus avellana HOM05D000293 ORTHO05D000180 1.6e-07 60.1 98 35.7
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 1.6e-07 60.1 48 58.3
PSO339G3814 Papaver somniferum HOM05D000293 ORTHO05D000180 1.6e-07 60.1 186 29.0
Aa31LG10G8370 Aethionema arabicum HOM05D000293 ORTHO05D000180 2.1e-07 59.7 130 31.5
BcaC07g39681 Brassica carinata HOM05D000293 ORTHO05D000180 2.7e-07 59.3 156 26.9
PSO063G7425 Papaver somniferum HOM05D000293 ORTHO05D000180 2.7e-07 59.3 165 29.1
BolC8t50452H Brassica oleracea HOM05D000293 ORTHO05D000180 3.6e-07 58.9 156 26.9
Cc06_g04470 Coffea canephora HOM05D000293 ORTHO05D000180 3.6e-07 58.9 48 54.2
PSO339G4263 Papaver somniferum HOM05D000293 ORTHO05D000180 4.7e-07 58.5 190 26.3
Nitab4.5_0002626g0050 Nicotiana tabacum HOM05D000293 ORTHO05D000180 8.0e-07 57.8 128 27.3
CANSAT80G1288 Cannabis sativa HOM05D000293 ORTHO05D000180 1.0e-06 57.4 48 52.1
Zm00001eb164740 Zea mays HOM05D000293 ORTHO05D000180 1.0e-06 57.4 127 26.8
AT3G53200 Arabidopsis thaliana HOM05D000293 ORTHO05D000180 1.8e-06 56.6 150 28.7
CARHR163100 Cardamine hirsuta HOM05D000293 ORTHO05D000180 1.8e-06 56.6 157 28.0
C08p28440 Brassica napus HOM05D000293 ORTHO05D000180 2.3e-06 56.2 156 26.3
A09p46190 Brassica napus HOM05D000293 ORTHO05D000180 3.0e-06 55.8 156 27.6
BraA09t40083Z Brassica rapa HOM05D000293 ORTHO05D000180 4.0e-06 55.5 168 27.4
AL5G34080 Arabidopsis lyrata HOM05D000293 ORTHO05D000180 5.2e-06 55.1 150 30.0
COL.COLO4_26921 Corchorus olitorius HOM05D000293 ORTHO05D000180 5.2e-06 55.1 104 34.6
HanXRQChr02g0051691 Helianthus annuus HOM05D000293 ORTHO05D000180 5.2e-06 55.1 31 74.2


User provided reference genes

Program Settings