Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035157 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 1.1e-40 169.5 83 100.0
CSS0044011 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 1.9e-24 115.5 79 68.4
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.7e-21 104.0 78 55.1
CSS0004372 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.7e-20 102.4 79 58.2
CSS0040117 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.3e-20 100.5 79 55.7
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-19 99.8 78 56.4
CSS0036010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.8e-19 99.0 79 58.2
CSS0036156 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 7.0e-19 97.1 81 55.6
CSS0007993 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 1.3e-17 92.8 78 53.8
CSS0030282 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 2.2e-17 92.0 76 53.9
CSS0018071 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 2.9e-17 91.7 78 55.1
CSS0046923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.8e-17 91.3 79 51.9
CSS0011923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.5e-16 89.4 77 49.4
CSS0015394 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.5e-16 89.4 79 51.9
CSS0033111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.9e-16 89.0 79 49.4
CSS0005580 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.5e-16 88.6 79 50.6
CSS0010630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.2e-16 87.8 79 49.4
CSS0039300 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.5e-16 87.4 79 48.1
CSS0041297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.5e-16 87.4 79 48.1
CSS0013840 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.2e-15 86.3 79 49.4
CSS0045024 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 3.6e-15 84.7 76 50.0
CSS0006902 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 4.7e-15 84.3 77 50.6
CSS0030478 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.0e-14 81.6 78 47.4
CSS0017637 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.0e-14 81.3 74 48.6
CSS0013913 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-13 79.0 71 52.1
CSS0049674 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-13 78.6 77 46.8
CSS0024915 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 3.4e-13 78.2 76 48.7
CSS0037277 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.8e-13 76.6 69 50.7
CSS0049668 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.4e-11 72.8 71 49.3
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 7.0e-11 70.5 71 43.7
CiPaw.01G225900 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.9e-10 67.4 81 37.0
CSS0038624 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 7.7e-10 67.0 43 72.1
CSS0048386 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 7.7e-10 67.0 43 72.1
CSS0028753 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.7e-09 65.9 77 41.6
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-09 65.5 49 55.1
CSS0042274 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.2e-09 65.5 61 47.5
CSS0038659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.8e-09 64.7 78 39.7
CiPaw.13G122400 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.8e-09 64.7 81 37.0
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 5.0e-09 64.3 64 48.4
CiPaw.01G208000 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.0e-09 64.3 81 35.8
CiPaw.06G060200 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.0e-09 64.3 77 37.7
CSS0039230 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.5e-09 63.9 61 50.8
Duzib147G1219 Durio zibethinus HOM05D000003 ORTHO05D000006 6.5e-09 63.9 79 35.4
CiPaw.01G031000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.1e-08 63.2 73 42.5
CiPaw.15G041600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.1e-08 63.2 73 42.5
Duzib147G1313 Durio zibethinus HOM05D000003 ORTHO05D000006 1.1e-08 63.2 79 35.4
CiPaw.11G119300 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.5e-08 62.8 73 38.4
CSS0044383 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.9e-08 62.4 64 48.4
COL.COLO4_28775 Corchorus olitorius HOM05D008263 ORTHO05D009583 2.5e-08 62.0 78 34.6
Atru.chr3.1818 Acer truncatum HOM05D000003 ORTHO05D000006 3.2e-08 61.6 74 40.5
Atru.chr6.308 Acer truncatum HOM05D000003 ORTHO05D000006 3.2e-08 61.6 79 35.4
CiPaw.11G178800 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.2e-08 61.6 73 37.0
CSS0010661 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-08 61.2 64 46.9
Cpa.g.sc138.24 Carica papaya HOM05D000003 ORTHO05D000006 4.2e-08 61.2 78 35.9
Cpa.g.sc25.167 Carica papaya HOM05D000230 ORTHO05D000176 4.2e-08 61.2 76 39.5
Cpa.g.sc7.211 Carica papaya HOM05D000003 ORTHO05D000006 4.2e-08 61.2 78 33.3
CiPaw.06G163400 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.2e-08 61.2 73 37.0
CiPaw.10G022700 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.2e-08 61.2 73 41.1
CSS0019901 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.5e-08 60.8 49 55.1
CiPaw.05G173100 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.5e-08 60.8 73 37.0
CsaV3_2G034750 Cucumis sativus L. HOM05D000003 ORTHO05D000006 7.2e-08 60.5 74 39.2
Medtr6g024380 Medicago truncatula HOM05D000003 ORTHO05D000004 7.2e-08 60.5 74 41.9
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 9.4e-08 60.1 79 41.8
CiPaw.03G068000 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.4e-08 60.1 70 41.4
CiPaw.06G024700 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.4e-08 60.1 73 38.4
MBI19_g24071_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 9.4e-08 60.1 75 38.7
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 59.7 76 35.5
CSS0000975 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.2e-07 59.7 55 47.3
CSS0041570 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.2e-07 59.7 49 57.1
Cpa.g.sc29.11 Carica papaya HOM05D000003 ORTHO05D000006 1.2e-07 59.7 78 33.3
CiPaw.03G101600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-07 59.7 73 37.0
CiPaw.05G158600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-07 59.7 73 38.4
Atru.chr2.2565 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-07 59.3 79 32.9
CSS0007116 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.6e-07 59.3 49 55.1
CiPaw.01G094800 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-07 59.3 73 41.1
CiPaw.08G109000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-07 59.3 73 37.0
Atru.chr1.3579 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-07 58.9 78 35.9
CiPaw.04G081300 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.1e-07 58.9 73 37.0
PSO170G4394 Papaver somniferum HOM05D000003 ORTHO05D000006 2.1e-07 58.9 77 35.1
Atru.chr3.2342 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-07 58.5 79 39.2
Atru.chr8.635 Acer truncatum HOM05D000003 ORTHO05D000006 2.7e-07 58.5 79 34.2
Cpa.g.sc96.61 Carica papaya HOM05D035046 ORTHO05D000006 2.7e-07 58.5 76 39.5
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 2.7e-07 58.5 77 37.7
CANSAT11G2262 Cannabis sativa HOM05D000003 ORTHO05D000006 3.6e-07 58.2 74 39.2
CiPaw.06G165800 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.6e-07 58.2 73 37.0
CiPaw.12G024400 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.6e-07 58.2 73 34.2
Hma1.2p1_0057F.1_g032280 Hydrangea macrophylla HOM05D000003 ORTHO05D000006 3.6e-07 58.2 76 31.6
Atru.chr10.907 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-07 57.8 79 36.7
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-07 57.8 79 38.0
CiPaw.02G057800 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.7e-07 57.8 73 35.6
CSS0007226 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.1e-07 57.4 47 55.3
CiPaw.12G029100 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.1e-07 57.4 73 37.0
CiPaw.12G097200 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.1e-07 57.4 73 32.9
CiPaw.14G112600 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.1e-07 57.4 73 39.7
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 6.1e-07 57.4 74 37.8
Gohir.A04G039600 Gossypium hirsutum HOM05D000003 ORTHO05D000006 8.0e-07 57.0 81 35.8
Medtr7g083690 Medicago truncatula HOM05D000003 ORTHO05D000004 8.0e-07 57.0 76 39.5
Aqoxy6G02709 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.0e-06 56.6 80 33.8
CiPaw.06G120200 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.0e-06 56.6 73 35.6
Gohir.A08G056950 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.0e-06 56.6 79 36.7
Atru.chr5.2394 Acer truncatum HOM05D000024 ORTHO05D000006 1.4e-06 56.2 79 38.0
Oeu002628.1 Olea europaea HOM05D000003 ORTHO05D000006 1.4e-06 56.2 78 37.2
Atru.chr3.3701 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 55.8 76 34.2
Atru.chr6.1051 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 55.8 71 40.8
CSS0005709 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.8e-06 55.8 50 48.0
CSS0006080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-06 55.8 53 49.1
CSS0013558 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.8e-06 55.8 74 33.8
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-06 55.8 53 49.1
CiPaw.07G008100 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.8e-06 55.8 73 38.4
Lj1g0006455 Lotus japonicus HOM05D000003 ORTHO05D000006 1.8e-06 55.8 79 32.9
PSO017G2762 Papaver somniferum HOM05D000003 ORTHO05D000006 1.8e-06 55.8 76 34.2
CiPaw.03G000600 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.3e-06 55.5 73 32.9
QL03p046628 Quercus lobata HOM05D000003 ORTHO05D000006 2.3e-06 55.5 80 37.5
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-06 55.1 79 38.0
CiPaw.09G124600 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.0e-06 55.1 73 35.6
ClCG06G011290 Citrullus lanatus HOM05D000003 ORTHO05D000006 3.0e-06 55.1 65 44.6
Glyma.06G180900 Glycine max HOM05D000003 ORTHO05D000006 3.0e-06 55.1 79 35.4
MBI16_g31707_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.0e-06 55.1 75 33.3
PSO832G3822 Papaver somniferum HOM05D000003 ORTHO05D000006 3.0e-06 55.1 74 33.8
Phvul.010G087401 Phaseolus vulgaris HOM05D000003 ORTHO05D000006 3.0e-06 55.1 79 34.2
Atru.chr2.1089 Acer truncatum HOM05D000003 ORTHO05D002259 4.0e-06 54.7 78 33.3
Aqoxy6G01768 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.0e-06 54.7 77 35.1
CiPaw.01G183000 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.0e-06 54.7 73 37.0
CiPaw.06G176400 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.0e-06 54.7 73 38.4
Medtr3g022950 Medicago truncatula HOM05D008558 ORTHO05D011658 4.0e-06 54.7 72 34.7
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 4.0e-06 54.7 74 37.8
PSO063G5944 Papaver somniferum HOM05D000003 ORTHO05D000006 4.0e-06 54.7 78 33.3
TPR.G18505 Trifolium pratense HOM05D000003 ORTHO05D000004 4.0e-06 54.7 79 34.2
CiPaw.02G060000 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.2e-06 54.3 73 32.9
CiPaw.03G074300 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.2e-06 54.3 73 37.0
Hund22684 Selenicereus undatus HOM05D001165 ORTHO05D000006 5.2e-06 54.3 78 30.8
PSO210G5568 Papaver somniferum HOM05D000003 ORTHO05D000006 6.8e-06 53.9 76 35.5
PSO384G2183 Papaver somniferum HOM05D000003 ORTHO05D000006 6.8e-06 53.9 73 37.0
Thecc.05G279300 Theobroma cacao HOM05D012808 ORTHO05D000006 6.8e-06 53.9 82 31.7
Thecc.10G008300 Theobroma cacao HOM05D000003 ORTHO05D000006 6.8e-06 53.9 79 31.6
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 8.8e-06 53.5 79 36.7
CiPaw.03G092400 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.8e-06 53.5 73 34.2
PSO017G7364 Papaver somniferum HOM05D000003 ORTHO05D000006 8.8e-06 53.5 78 30.8
PSO832G2789 Papaver somniferum HOM05D000003 ORTHO05D000006 8.8e-06 53.5 77 32.5


User provided reference genes

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