Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035152 Camellia sinensis var. sinensis HOM05D001098 ORTHO05D002527 1.3e-76 289.7 151 100.0
CSS0035199 Camellia sinensis var. sinensis HOM05D001098 ORTHO05D002527 1.7e-23 113.2 151 49.0
Dinv41864 Davidia involucrata HOM05D001098 ORTHO05D002527 8.5e-23 110.9 150 48.0
Actinidia17990 Actinidia chinensis HOM05D001098 ORTHO05D002527 1.4e-22 110.2 150 48.0
MBI01_g17242_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 4.2e-22 108.6 161 44.7
Manes.18G113200 Manihot esculenta HOM05D001098 ORTHO05D002527 4.2e-22 108.6 150 46.0
Rhsim05G0044700 Rhododendron simsii HOM05D001098 ORTHO05D002527 5.5e-22 108.2 149 47.0
MBI01_g32424_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 7.2e-22 107.8 144 47.9
SalBow1G7648 Salvia bowleyana HOM05D001098 ORTHO05D002527 1.2e-21 107.1 150 45.3
SalBow7G2674 Salvia bowleyana HOM05D001098 ORTHO05D002527 4.7e-21 105.1 150 45.3
Migut.B00005 Erythranthe guttata HOM05D001098 ORTHO05D002527 7.9e-21 104.4 150 46.0
TAR376G1176 Trochodendron aralioides HOM05D003539 ORTHO05D004111 1.0e-20 104.0 150 46.0
TAR381G1518 Trochodendron aralioides HOM05D001098 ORTHO05D002527 1.0e-20 104.0 150 47.3
Actinidia20579 Actinidia chinensis HOM05D001098 ORTHO05D002527 2.3e-20 102.8 150 45.3
Lj9A408T81 Lonicera japonica HOM05D001098 ORTHO05D002527 5.2e-20 101.7 158 43.7
Manes.02G204100 Manihot esculenta HOM05D001098 ORTHO05D002527 5.2e-20 101.7 150 44.7
GSVIVG01023864001 Vitis vinifera HOM05D001098 ORTHO05D002527 6.7e-20 101.3 150 46.0
PGR142G3259 Punica granatum HOM05D001098 ORTHO05D002527 8.8e-20 100.9 150 44.7
Hma1.2p1_0032F.1_g018710 Hydrangea macrophylla HOM05D001098 ORTHO05D002527 2.6e-19 99.4 150 45.3
Duzib132G1111 Durio zibethinus HOM05D001098 ORTHO05D002527 1.7e-18 96.7 151 44.4
Rhsim11G0198300 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.4e-17 93.6 121 51.2
Nn6g31647 Nelumbo nucifera HOM05D001098 ORTHO05D002527 1.8e-17 93.2 150 45.3
PSO541G0403 Papaver somniferum HOM05D001098 ORTHO05D002527 2.4e-17 92.8 156 41.7
Sed0023927 Sechium edule HOM05D001098 ORTHO05D002527 2.4e-17 92.8 144 45.8
Carub.0007s0496 Capsella rubella HOM05D001098 ORTHO05D002527 4.1e-17 92.0 150 41.3
Sed0023457 Sechium edule HOM05D001098 ORTHO05D002527 4.1e-17 92.0 146 43.8
Hund06357 Selenicereus undatus HOM05D001098 ORTHO05D002527 4.1e-17 92.0 154 41.6
FAN15G1608 Fragaria x ananassa HOM05D001098 ORTHO05D002527 7.0e-17 91.3 153 44.4
Eucgr.I01538 Eucalyptus grandis HOM05D001098 ORTHO05D002527 9.1e-17 90.9 150 41.3
Thhalv10025582m.g Eutrema salsugineum HOM05D001098 ORTHO05D002527 9.1e-17 90.9 150 40.0
ClCG02G010830 Citrullus lanatus HOM05D001098 ORTHO05D002527 1.2e-16 90.5 121 47.1
Thecc.02G147100 Theobroma cacao HOM05D001098 ORTHO05D002527 1.2e-16 90.5 150 43.3
MSTRG.16957 Avicennia marina HOM05D001098 ORTHO05D002527 1.6e-16 90.1 158 43.0
FvH4_2g16930 Fragaria vesca HOM05D001098 ORTHO05D002527 2.0e-16 89.7 153 44.4
FAN24G1038 Fragaria x ananassa HOM05D001098 ORTHO05D002527 2.0e-16 89.7 153 44.4
MBI04_g31202_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 2.0e-16 89.7 110 50.9
CsaV3_6G010050 Cucumis sativus L. HOM05D001098 ORTHO05D002527 2.6e-16 89.4 145 44.1
CARHR243660 Cardamine hirsuta HOM05D001098 ORTHO05D002527 3.5e-16 89.0 150 40.7
RcHm_v2.0_Chr6g0281071 Rosa chinensis HOM05D001098 ORTHO05D002527 3.5e-16 89.0 150 42.7
Sc08g0002100 Simmondsia chinensis HOM05D001098 ORTHO05D002527 3.5e-16 89.0 150 40.7
EL10Ac9g21546 Beta vulgaris HOM05D001098 ORTHO05D002527 4.5e-16 88.6 113 50.4
Oeu012219.1 Olea europaea HOM05D001098 ORTHO05D002527 4.5e-16 88.6 106 53.8
BcaB03g12410 Brassica carinata HOM05D001098 ORTHO05D002527 5.9e-16 88.2 158 40.5
CANSAT25G0204 Cannabis sativa HOM05D001098 ORTHO05D002527 5.9e-16 88.2 150 40.0
Duzib248G0955 Durio zibethinus HOM05D001098 ORTHO05D002527 5.9e-16 88.2 150 42.7
Aa31sc18G70 Aethionema arabicum HOM05D001098 ORTHO05D002527 7.7e-16 87.8 106 50.9
FAN27G2361 Fragaria x ananassa HOM05D001098 ORTHO05D002527 7.7e-16 87.8 153 43.1
Sp7g33130 Schrenkiella parvula HOM05D001098 ORTHO05D002527 7.7e-16 87.8 150 39.3
Atru.chr5.3569 Acer truncatum HOM05D001098 ORTHO05D002527 1.0e-15 87.4 116 50.0
AL7G15820 Arabidopsis lyrata HOM05D001098 ORTHO05D002527 1.3e-15 87.0 150 39.3
COL.COLO4_34319 Corchorus olitorius HOM05D001098 ORTHO05D002527 1.3e-15 87.0 150 42.7
CiPaw.05G093900 Carya illinoinensis HOM05D001098 ORTHO05D002527 1.7e-15 86.7 110 50.9
CiPaw.06G114700 Carya illinoinensis HOM05D001098 ORTHO05D002527 2.2e-15 86.3 153 42.5
Ciclev10028748m.g Citrus clementina HOM05D001098 ORTHO05D002527 2.2e-15 86.3 141 46.1
BcaNung02390 Brassica carinata HOM05D001098 ORTHO05D002527 2.9e-15 85.9 154 37.0
BcaNung06457 Brassica carinata HOM05D001098 ORTHO05D002527 2.9e-15 85.9 153 37.9
C07p61120 Brassica napus HOM05D001098 ORTHO05D002527 2.9e-15 85.9 154 37.0
BolC7t46536H Brassica oleracea HOM05D001098 ORTHO05D002527 2.9e-15 85.9 154 37.0
HPP92_015755 Vanilla planifolia HOM05D001098 ORTHO05D002527 2.9e-15 85.9 107 50.5
Glyma.02G312000 Glycine max HOM05D001098 ORTHO05D002527 3.8e-15 85.5 149 42.3
A03p63540 Brassica napus HOM05D001098 ORTHO05D002527 5.0e-15 85.1 154 37.0
AUR62013184 Chenopodium quinoa HOM05D001098 ORTHO05D002527 5.0e-15 85.1 154 39.0
DCAR_006385 Daucus carota HOM05D001098 ORTHO05D002527 5.0e-15 85.1 118 44.9
PSO675G9097 Papaver somniferum HOM05D001098 ORTHO05D002527 6.5e-15 84.7 154 40.3
Ah.01g017660 Amaranthus hybridus HOM05D001098 ORTHO05D002527 8.5e-15 84.3 154 38.3
A08p21890 Brassica napus HOM05D001098 ORTHO05D002527 8.5e-15 84.3 160 38.8
BraA08t34142Z Brassica rapa HOM05D001098 ORTHO05D002527 8.5e-15 84.3 160 38.8
Gohir.D04G152000 Gossypium hirsutum HOM05D001098 ORTHO05D002527 8.5e-15 84.3 150 41.3
Gorai.012G138800 Gossypium raimondii HOM05D001098 ORTHO05D002527 8.5e-15 84.3 150 41.3
Gohir.A04G111700 Gossypium hirsutum HOM05D001098 ORTHO05D002527 1.1e-14 84.0 150 41.3
CDE10G0149 Ceratophyllum demersum HOM05D001098 ORTHO05D002527 1.5e-14 83.6 161 38.5
BraA03t15424Z Brassica rapa HOM05D001098 ORTHO05D002527 1.9e-14 83.2 154 36.4
Aqoxy6G01547 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 2.5e-14 82.8 150 40.0
TWI79G1444 Tripterygium wilfordii HOM05D001098 ORTHO05D002527 2.5e-14 82.8 150 39.3
ECA233G3688 Erigeron canadensis HOM05D001098 ORTHO05D002527 3.2e-14 82.4 128 42.2
C03p80640 Brassica napus HOM05D001098 ORTHO05D002527 4.2e-14 82.0 156 39.7
QL06p014336 Quercus lobata HOM05D001098 ORTHO05D002527 4.2e-14 82.0 118 44.1
arahy.Tifrunner.gnm1.ann1.1X8DY6 Arachis hypogaea HOM05D001098 ORTHO05D002527 5.5e-14 81.6 100 51.0
arahy.Tifrunner.gnm1.ann1.7NF1VE Arachis hypogaea HOM05D001098 ORTHO05D002527 5.5e-14 81.6 100 51.0
arahy.Tifrunner.gnm1.ann1.N1X7B2 Arachis hypogaea HOM05D001098 ORTHO05D002527 5.5e-14 81.6 100 51.0
BcaC01g00493 Brassica carinata HOM05D001098 ORTHO05D002527 5.5e-14 81.6 156 39.7
Glyma.14G000600 Glycine max HOM05D001098 ORTHO05D002527 5.5e-14 81.6 100 51.0
Lsat_1_v5_gn_8_120701 Lactuca sativa HOM05D001098 ORTHO05D002527 5.5e-14 81.6 150 39.3
HanXRQChr16g0515181 Helianthus annuus HOM05D001098 ORTHO05D002527 7.2e-14 81.3 150 39.3
AUR62010182 Chenopodium quinoa HOM05D001098 ORTHO05D002527 9.4e-14 80.9 107 48.6
SHI27585 Sapria himalayana HOM05D001098 ORTHO05D002527 9.4e-14 80.9 110 47.3
ATR0057G016 Amborella trichopoda HOM05D001098 ORTHO05D002527 1.2e-13 80.5 150 37.3
BolC3t20307H Brassica oleracea HOM05D001098 ORTHO05D002527 1.2e-13 80.5 159 37.1
Haze_01974 Corylus avellana HOM05D001098 ORTHO05D002527 1.2e-13 80.5 150 40.7
TWI75G1677 Tripterygium wilfordii HOM05D001098 ORTHO05D002527 1.2e-13 80.5 150 38.0
A01p03220 Brassica napus HOM05D001098 ORTHO05D002527 1.6e-13 80.1 103 47.6
BraA01t00307Z Brassica rapa HOM05D001098 ORTHO05D002527 1.6e-13 80.1 103 47.6
Prupe.8G181000 Prunus persica HOM05D001098 ORTHO05D002527 1.6e-13 80.1 152 40.8
Aqoxy3G04159 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 2.1e-13 79.7 151 39.7
Haze_10071 Corylus avellana HOM05D001098 ORTHO05D002527 2.1e-13 79.7 97 51.5
Potri.016G113200 Populus trichocarpa HOM05D001098 ORTHO05D002527 2.1e-13 79.7 99 49.5
Ca_06505_v3 Cicer arietinum L. HOM05D001098 ORTHO05D002527 2.7e-13 79.3 105 46.7
Sabra16G0108800 Salix brachista HOM05D000241 ORTHO05D001001 3.6e-13 79.0 99 48.5
Lalb_Chr10g0107701 Lupinus albus HOM05D001098 ORTHO05D002527 4.7e-13 78.6 159 37.1
LjContig00081g0022408 Lotus japonicus HOM05D001098 ORTHO05D002527 6.1e-13 78.2 100 49.0
Os07g0573700 Oryza sativa ssp. japonica HOM05D001098 ORTHO05D002527 6.1e-13 78.2 101 48.5
VMungo0647G1862 Vigna mungo HOM05D001098 ORTHO05D002527 1.0e-12 77.4 94 51.1
TPR.G18630 Trifolium pratense HOM05D001098 ORTHO05D002527 1.4e-12 77.0 96 50.0
MD05G1141000 Malus domestica HOM05D001098 ORTHO05D002527 1.8e-12 76.6 150 39.3
Phvul.008G292800 Phaseolus vulgaris HOM05D001098 ORTHO05D002527 2.3e-12 76.3 94 51.1
Psat2g000520 Pisum sativum HOM05D001098 ORTHO05D002527 2.3e-12 76.3 94 50.0
Zm00001eb412040 Zea mays HOM05D001098 ORTHO05D002527 3.0e-12 75.9 154 35.7
Aqoxy2G01309 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 5.2e-12 75.1 104 46.2
Oeu050440.1 Olea europaea HOM05D001098 ORTHO05D002527 5.2e-12 75.1 106 50.0
Gohir.A13G064400 Gossypium hirsutum HOM05D001098 ORTHO05D002527 6.7e-12 74.7 95 50.5
unitig_90.g27539 Utricularia gibba HOM05D001098 ORTHO05D002527 1.2e-11 73.9 107 43.9
QL05p062370 Quercus lobata HOM05D001098 ORTHO05D002527 2.6e-11 72.8 111 42.3
SEGI_11233 Sequoiadendron giganteum HOM05D001098 ORTHO05D002527 4.4e-11 72.0 97 47.4
Solyc11g008590.2 Solanum lycopersicum HOM05D001098 ORTHO05D002527 5.7e-11 71.6 112 44.6
Sopen11g004380 Solanum pennellii HOM05D001098 ORTHO05D002527 5.7e-11 71.6 112 44.6
MD11G1242300 Malus domestica HOM05D001098 ORTHO05D002527 7.5e-11 71.2 94 50.0
Nitab4.5_0001003g0090 Nicotiana tabacum HOM05D001098 ORTHO05D002527 2.2e-10 69.7 118 42.4
SMO118G0063 Selaginella moellendorffii HOM05D001098 ORTHO05D002527 2.2e-10 69.7 98 43.9
Zm00001eb325140 Zea mays HOM05D001098 ORTHO05D002527 2.2e-10 69.7 107 44.9
Hma1.2p1_0271F.1_g108730 Hydrangea macrophylla HOM05D001098 ORTHO05D002527 4.8e-10 68.6 124 43.5
Nitab4.5_0009631g0030 Nicotiana tabacum HOM05D001098 ORTHO05D002527 4.8e-10 68.6 118 42.4
Medtr5g099280 Medicago truncatula HOM05D001098 ORTHO05D002527 6.3e-10 68.2 94 46.8
PGSC0003DMG400016250 Solanum tuberosum HOM05D001098 ORTHO05D002527 8.2e-10 67.8 90 50.0
CAN.G321.15 Capsicum annuum HOM05D001098 ORTHO05D002527 3.1e-09 65.9 92 47.8
MD05G1140500 Malus domestica HOM05D001098 ORTHO05D002527 5.3e-09 65.1 161 36.0
arahy.Tifrunner.gnm1.ann1.5U49GI Arachis hypogaea HOM05D001098 ORTHO05D002527 3.5e-08 62.4 150 34.0
BolC1t00347H Brassica oleracea HOM05D001098 ORTHO05D002527 1.3e-07 60.5 87 47.1
Cc09_g10880 Coffea canephora HOM05D001098 ORTHO05D002527 6.5e-07 58.2 85 48.2
Peaxi162Scf00296g01213 Petunia axillaris HOM05D001098 ORTHO05D002527 1.1e-06 57.4 84 45.2
arahy.Tifrunner.gnm1.ann1.AZV8JK Arachis hypogaea HOM05D001098 ORTHO05D002527 1.9e-06 56.6 71 47.9


User provided reference genes

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