Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.9e-87 325.9 170 100.0
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 7.3e-39 164.5 85 100.0
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 1.4e-29 133.7 83 79.5
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.1e-29 132.5 85 83.5
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 5.2e-29 131.7 84 79.8
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 5.2e-29 131.7 84 79.8
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 2.6e-28 129.4 85 80.0
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 2.2e-27 126.3 85 74.1
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 2.2e-27 126.3 83 75.9
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 2.9e-27 125.9 85 75.3
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 2.9e-27 125.9 85 76.5
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 4.9e-27 125.2 85 74.1
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 6.4e-27 124.8 85 75.3
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 1.1e-26 124.0 85 74.1
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 1.1e-26 124.0 100 70.0
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 1.9e-26 123.2 85 76.5
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 3.2e-26 122.5 83 75.9
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 4.1e-26 122.1 87 73.6
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 7.1e-26 121.3 83 74.7
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 9.2e-26 120.9 85 74.1
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 9.2e-26 120.9 85 70.6
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 9.2e-26 120.9 85 74.1
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.2e-25 120.6 85 72.9
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 1.6e-25 120.2 79 75.9
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 1.6e-25 120.2 85 71.8
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 2.7e-25 119.4 83 73.5
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 2.7e-25 119.4 85 72.9
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 3.5e-25 119.0 84 70.2
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 3.5e-25 119.0 85 74.1
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 7.8e-25 117.9 85 71.8
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 1.3e-24 117.1 83 71.1
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 1.3e-24 117.1 83 69.9
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 1.3e-24 117.1 85 69.4
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 1.7e-24 116.7 85 70.6
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 1.7e-24 116.7 83 73.5
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 2.3e-24 116.3 85 71.8
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.3e-24 116.3 85 71.8
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.3e-24 116.3 85 71.8
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 3.0e-24 115.9 85 71.8
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 3.0e-24 115.9 84 72.6
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 3.0e-24 115.9 85 71.8
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 1.9e-23 113.2 86 68.6
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 3.3e-23 112.5 76 77.6
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 3.3e-23 112.5 96 62.5
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 5.6e-23 111.7 84 70.2
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 7.3e-23 111.3 85 69.4
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 1.2e-22 110.5 80 72.5
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 1.2e-22 110.5 73 76.7
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 1.6e-22 110.2 82 65.9
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 4.7e-22 108.6 85 65.9
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 6.2e-22 108.2 84 61.9
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 8.1e-22 107.8 85 67.1
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 1.1e-21 107.5 85 67.1
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.8e-21 106.7 83 63.9
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.8e-21 106.7 83 63.9
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.8e-21 106.7 83 63.9
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 1.8e-21 106.7 85 65.9
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 8.9e-21 104.4 69 75.4
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.2e-20 104.0 83 63.9
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 2.0e-20 103.2 85 64.7
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 2.6e-20 102.8 78 70.5
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 3.4e-20 102.4 83 63.9
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 3.4e-20 102.4 87 63.2
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 7.6e-20 101.3 83 63.9
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 2.9e-19 99.4 83 62.7
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 2.9e-19 99.4 85 62.4
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 2.9e-19 99.4 60 85.0
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 3.8e-19 99.0 85 62.4
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 4.9e-19 98.6 83 60.2
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 1.4e-18 97.1 83 60.2
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.9e-18 96.7 83 60.2
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 7.1e-18 94.7 85 63.5
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 7.1e-18 94.7 71 67.6
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 9.3e-18 94.4 76 64.5
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 9.3e-18 94.4 69 71.0
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 2.1e-17 93.2 67 70.1
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 2.7e-17 92.8 83 57.8
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 2.7e-17 92.8 130 46.9
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 1.0e-16 90.9 73 64.4
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 1.3e-16 90.5 58 79.3
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 1.7e-16 90.1 85 61.2
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 6.6e-16 88.2 66 66.7
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.5e-15 87.0 67 67.2
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.9e-15 86.7 83 59.0
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 2.5e-15 86.3 76 63.2
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 2.8e-14 82.8 58 74.1
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 8.1e-14 81.3 60 68.3
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 5.3e-13 78.6 59 69.5
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 9.9e-12 74.3 47 78.7
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 4.9e-11 72.0 70 52.9
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 4.9e-11 72.0 73 58.9
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 6.4e-11 71.6 64 56.2
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 8.4e-11 71.2 75 45.3
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 3.2e-10 69.3 61 60.7
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 2.1e-09 66.6 45 73.3
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 6.0e-09 65.1 49 65.3
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 7.9e-09 64.7 40 80.0
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 4.3e-07 58.9 45 64.4


User provided reference genes

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