Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 9.0e-181 636.7 306 100.0
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 7.9e-177 623.6 300 100.0
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 6.3e-150 534.3 300 83.7
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 7.7e-148 527.3 303 82.2
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 8.8e-144 513.8 300 81.0
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 2.1e-137 492.7 295 78.0
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 8.0e-137 490.7 288 79.2
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 1.4e-136 490.0 297 75.4
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 4.4e-135 485.0 297 73.7
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 5.7e-135 484.6 297 73.7
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 1.3e-134 483.4 297 73.7
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 5.5e-130 468.0 297 71.4
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 6.1e-129 464.5 295 72.9
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 8.0e-129 464.2 293 72.7
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 1.0e-128 463.8 295 72.5
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 6.8e-128 461.1 299 71.6
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 4.4e-127 458.4 297 70.4
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 4.4e-127 458.4 299 71.2
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 5.7e-127 458.0 295 71.2
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 5.7e-127 458.0 294 72.8
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 1.7e-126 456.4 303 67.7
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 2.8e-126 455.7 297 70.4
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 2.8e-126 455.7 297 70.4
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 1.1e-125 453.8 294 68.7
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 1.1e-125 453.8 295 71.2
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 1.4e-125 453.4 297 69.7
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 1.8e-125 453.0 294 69.0
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 3.1e-125 452.2 299 69.6
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 4.1e-125 451.8 299 70.2
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 7.0e-125 451.1 299 70.2
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 1.6e-124 449.9 297 69.4
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 2.0e-124 449.5 303 70.0
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 3.5e-124 448.7 294 70.7
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 1.0e-123 447.2 299 69.9
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 2.9e-123 445.7 296 71.6
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 2.9e-123 445.7 297 70.0
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 8.6e-123 444.1 296 69.3
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 4.3e-122 441.8 299 68.9
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 7.3e-122 441.0 297 70.7
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 1.2e-121 440.3 299 68.9
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 2.1e-121 439.5 294 69.7
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 2.8e-121 439.1 295 67.8
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 2.8e-121 439.1 303 67.7
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 4.7e-121 438.3 299 68.6
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 8.0e-121 437.6 296 68.6
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 1.4e-120 436.8 296 67.6
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 1.4e-120 436.8 296 67.6
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.8e-120 436.4 294 68.0
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 4.0e-120 435.3 297 68.7
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 4.0e-120 435.3 297 68.7
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 1.5e-119 433.3 296 67.6
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 4.4e-119 431.8 296 69.9
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 5.8e-119 431.4 300 66.0
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 8.3e-118 427.6 288 67.4
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.1e-117 427.2 321 63.2
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 1.1e-117 427.2 297 64.6
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 1.9e-117 426.4 303 65.0
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 9.2e-117 424.1 304 63.8
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 1.0e-115 420.6 296 65.9
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 1.7e-115 419.9 294 67.3
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 1.7e-115 419.9 296 64.9
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 3.9e-115 418.7 298 65.8
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 3.9e-115 418.7 299 63.9
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.9e-114 416.4 308 63.3
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 1.9e-114 416.4 246 80.9
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 2.5e-114 416.0 297 64.6
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 2.5e-114 416.0 296 65.9
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 4.3e-114 415.2 299 63.2
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 4.3e-114 415.2 300 62.0
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 9.5e-114 414.1 298 63.1
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 3.6e-113 412.1 296 64.9
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 1.4e-112 410.2 296 62.8
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 5.2e-112 408.3 298 64.1
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 8.9e-112 407.5 296 64.2
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 7.5e-111 404.4 298 65.8
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 2.2e-110 402.9 294 63.6
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 8.3e-110 401.0 300 62.3
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 8.3e-110 401.0 296 62.8
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 4.1e-109 398.7 313 59.4
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 7.0e-109 397.9 295 62.7
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 1.2e-108 397.1 297 62.6
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 2.3e-107 392.9 297 59.9
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 3.0e-107 392.5 303 62.7
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 4.7e-105 385.2 299 60.2
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 4.7e-105 385.2 294 61.6
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 4.1e-101 372.1 271 63.1
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 3.5e-100 369.0 297 59.9
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 3.3e-98 362.5 294 55.4
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 5.6e-98 361.7 299 55.5
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 9.5e-98 360.9 297 58.2
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 8.9e-96 354.4 293 55.3
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 5.8e-95 351.7 267 59.6
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 1.3e-94 350.5 298 57.0
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 1.5e-90 337.0 311 53.4
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 1.8e-88 330.1 250 59.2
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 6.2e-73 278.5 311 46.3
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 1.4e-64 250.8 303 42.6
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 6.5e-62 241.9 305 44.6
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 2.4e-48 196.8 122 71.3
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 3.0e-43 179.9 172 51.7
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 2.2e-41 173.7 199 46.2
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 1.8e-27 127.5 312 32.1
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 2.7e-20 103.6 204 31.4
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 8.8e-19 98.6 101 48.5
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 1.9e-13 80.9 255 23.1
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 3.6e-12 76.6 44 77.3
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 1.8e-11 74.3 256 26.6
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 7.0e-08 62.4 41 61.0


User provided reference genes

Program Settings