Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035119 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 1.1e-214 749.6 363 100.0
CSS0020895 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 1.7e-125 453.4 427 57.6
CSS0028413 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 9.2e-124 447.6 418 58.1
Dinv35017 Davidia involucrata HOM05D008898 ORTHO05D001155 1.7e-98 363.6 396 49.5
Lsat_1_v5_gn_0_16480 Lactuca sativa HOM05D008898 ORTHO05D001155 7.4e-81 305.1 414 40.3
HanXRQChr17g0547181 Helianthus annuus HOM05D008898 ORTHO05D001155 1.2e-70 271.2 380 38.9
HanXRQChr15g0474391 Helianthus annuus HOM05D008898 ORTHO05D001155 6.5e-69 265.4 390 38.5
HanXRQChr15g0474331 Helianthus annuus HOM05D008898 ORTHO05D001155 3.9e-66 256.1 392 37.8
HanXRQChr15g0474341 Helianthus annuus HOM05D008898 ORTHO05D001155 2.2e-64 250.4 382 36.6
ECA246G1437 Erigeron canadensis HOM05D008898 ORTHO05D001155 3.7e-64 249.6 303 39.9
HanXRQChr01g0029461 Helianthus annuus HOM05D008898 ORTHO05D001155 2.0e-62 243.8 388 35.6
HanXRQChr15g0474381 Helianthus annuus HOM05D008898 ORTHO05D001155 3.6e-59 233.0 337 36.2
Lj7A407T50 Lonicera japonica HOM05D008898 ORTHO05D001155 1.8e-58 230.7 309 42.1
Lsat_1_v5_gn_4_180620 Lactuca sativa HOM05D008898 ORTHO05D001155 4.8e-56 222.6 392 36.5
Lsat_1_v5_gn_5_38981 Lactuca sativa HOM05D008898 ORTHO05D001155 5.0e-37 159.5 297 33.3
Lsat_1_v5_gn_5_38300 Lactuca sativa HOM05D008898 ORTHO05D001155 7.5e-33 145.6 374 29.1
Lsat_1_v5_gn_5_38200 Lactuca sativa HOM05D008898 ORTHO05D001155 7.0e-31 139.0 240 32.9
Lsat_1_v5_gn_5_38761 Lactuca sativa HOM05D008898 ORTHO05D001155 4.5e-30 136.3 293 31.7
Dinv34857 Davidia involucrata HOM05D001729 ORTHO05D001155 2.5e-28 130.6 386 28.8
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 4.2e-28 129.8 408 29.2
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 4.1e-23 113.2 391 26.1
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 7.8e-22 109.0 406 25.6
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 7.8e-22 109.0 406 25.6
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 7.8e-22 109.0 406 25.6
Rhsim08G0237800 Rhododendron simsii HOM05D001729 ORTHO05D001155 1.1e-20 105.1 405 25.7
DCAR_004585 Daucus carota HOM05D001729 ORTHO05D001155 4.3e-20 103.2 393 27.0
PGSC0003DMG400002644 Solanum tuberosum HOM05D008898 ORTHO05D001155 1.0e-18 98.6 203 34.0
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 6.8e-18 95.9 396 27.3
PGR142G1547 Punica granatum HOM05D002743 ORTHO05D002895 2.2e-16 90.9 394 25.1
Lsat_1_v5_gn_5_31100 Lactuca sativa HOM05D001729 ORTHO05D001155 1.1e-15 88.6 324 28.1
Nitab4.5_0002383g0130 Nicotiana tabacum HOM05D008898 ORTHO05D001155 1.6e-14 84.7 367 26.7
Lj2A1107G68 Lonicera japonica HOM05D001729 ORTHO05D001155 3.5e-14 83.6 432 24.5
Lsat_1_v5_gn_6_92061 Lactuca sativa HOM05D001729 ORTHO05D001155 7.3e-12 75.9 409 25.9
Lj2A946T25 Lonicera japonica HOM05D001729 ORTHO05D001155 9.5e-12 75.5 425 24.9
QL05p014501 Quercus lobata HOM05D001729 ORTHO05D001155 8.0e-11 72.4 418 23.4
Hund23304 Selenicereus undatus HOM05D009075 ORTHO05D011069 1.1e-10 72.0 218 23.9
Migut.L01260 Erythranthe guttata HOM05D001729 ORTHO05D001155 1.4e-10 71.6 347 26.8
FvH4_6g01541 Fragaria vesca HOM05D001729 ORTHO05D001155 2.6e-09 67.4 230 24.3
FAN14G2874 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.4e-09 66.6 230 24.3
MD15G1018100 Malus domestica HOM05D001729 ORTHO05D001155 9.8e-09 65.5 246 25.6
AUR62020544 Chenopodium quinoa HOM05D017185 ORTHO05D002895 3.7e-08 63.5 180 23.9
DCAR_013984 Daucus carota HOM05D008898 ORTHO05D016080 1.1e-07 62.0 116 36.2
Lj2C966T5 Lonicera japonica HOM05D008898 ORTHO05D001155 1.1e-07 62.0 178 26.4
AUR62015660 Chenopodium quinoa HOM05D001340 ORTHO05D005342 1.4e-07 61.6 210 24.3
FAN09G0290 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.5e-06 57.0 133 29.3
HanXRQChr15g0494081 Helianthus annuus HOM05D008898 ORTHO05D001155 3.5e-06 57.0 50 48.0
MD05G1244200 Malus domestica HOM05D001729 ORTHO05D001155 4.6e-06 56.6 218 26.1
Ciclev10005014m.g Citrus clementina HOM05D007162 ORTHO05D007631 6.0e-06 56.2 310 26.1
QL04p020224 Quercus lobata HOM05D002420 ORTHO05D002422 7.8e-06 55.8 240 23.8


User provided reference genes

Program Settings