Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035081 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.8e-32 142.5 101 100.0
CSS0038194 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 4.6e-25 117.9 57 98.2
CSS0045499 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 6.7e-24 114.0 57 94.7
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.9e-16 88.2 43 95.3
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 2.3e-08 62.4 38 78.9
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 5.2e-08 61.2 39 76.9
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 6.7e-08 60.8 38 76.3
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 6.7e-08 60.8 47 68.1
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 8.8e-08 60.5 51 66.7
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 8.8e-08 60.5 38 76.3
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 8.8e-08 60.5 38 76.3
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 1.5e-07 59.7 38 78.9
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 2.0e-07 59.3 38 76.3
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 2.0e-07 59.3 38 78.9
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 2.0e-07 59.3 38 73.7
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 3.3e-07 58.5 38 73.7
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 3.3e-07 58.5 37 78.4
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 4.4e-07 58.2 38 73.7
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 4.4e-07 58.2 38 73.7
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 5.7e-07 57.8 37 78.4
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 5.7e-07 57.8 37 75.7
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 7.5e-07 57.4 38 73.7
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 9.7e-07 57.0 38 73.7
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 1.7e-06 56.2 38 73.7
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 2.2e-06 55.8 38 73.7
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 2.2e-06 55.8 38 73.7
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.8e-06 55.5 38 71.1
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.8e-06 55.5 38 71.1
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.8e-06 55.5 38 71.1
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.8e-06 55.5 38 71.1
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 2.8e-06 55.5 36 75.0
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 2.8e-06 55.5 38 68.4
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 3.7e-06 55.1 37 73.0
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 3.7e-06 55.1 38 71.1
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 4.8e-06 54.7 38 71.1
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 6.3e-06 54.3 38 63.2
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 6.3e-06 54.3 38 71.1
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 6.3e-06 54.3 38 68.4
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 8.2e-06 53.9 38 71.1
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 8.2e-06 53.9 38 68.4


User provided reference genes

Program Settings