Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 5.2e-202 707.6 383 100.0
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 3.7e-200 701.4 385 99.2
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 5.3e-146 521.5 359 73.5
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 9.0e-138 494.2 319 76.8
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 1.4e-135 486.9 357 70.3
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 3.6e-134 482.3 343 70.6
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 5.5e-127 458.4 317 71.0
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 2.7e-126 456.1 342 67.8
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 7.9e-126 454.5 299 75.3
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 2.0e-124 449.9 310 71.6
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 2.6e-124 449.5 313 70.9
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 3.7e-123 445.7 316 69.9
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 4.8e-123 445.3 316 69.9
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 1.8e-122 443.4 331 68.0
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 1.6e-118 430.3 320 66.6
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 6.7e-117 424.9 269 77.7
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 2.0e-116 423.3 329 64.4
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 2.0e-116 423.3 342 64.3
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 2.0e-116 423.3 334 65.3
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 5.7e-116 421.8 331 64.7
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 3.7e-115 419.1 332 65.1
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 7.0e-114 414.8 305 68.2
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 4.5e-113 412.1 310 69.0
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 5.5e-111 405.2 334 60.5
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 5.2e-109 398.7 341 59.2
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 2.6e-108 396.4 286 66.1
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 4.8e-107 392.1 253 77.1
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 6.3e-107 391.7 296 66.2
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 9.8e-100 367.9 271 68.3
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 9.8e-100 367.9 372 54.8
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 2.8e-94 349.7 241 71.4
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 2.8e-94 349.7 326 56.7
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 5.6e-87 325.5 292 56.5
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 8.0e-86 321.6 280 56.1
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 4.4e-84 315.8 294 55.4
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 9.8e-84 314.7 283 56.5
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 6.0e-81 305.4 299 51.2
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.1e-79 301.2 226 67.7
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 1.5e-79 300.8 288 54.2
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.4e-76 289.7 214 67.3
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 7.1e-58 228.8 157 66.2
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 1.1e-53 214.9 254 46.5
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 8.4e-51 205.3 173 60.1
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 7.1e-50 202.2 166 59.0
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 2.7e-49 200.3 140 72.1
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 3.9e-48 196.4 161 59.0
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 6.2e-46 189.1 175 58.3
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 1.5e-44 184.5 140 65.7
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 9.3e-42 175.3 207 51.7
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 4.6e-41 172.9 117 79.5
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 4.6e-41 172.9 148 60.8
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.0e-40 171.8 137 67.9
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.4e-36 156.8 131 62.6
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 7.4e-31 139.0 81 77.8
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 5.3e-29 132.9 106 63.2
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 7.2e-18 95.9 134 44.0
FAN15G2669 Fragaria x ananassa HOM05D008372 ORTHO05D010559 1.8e-08 64.7 62 54.8
Potri.017G115002 Populus trichocarpa HOM05D008372 ORTHO05D010559 3.0e-08 63.9 62 62.9


User provided reference genes

Program Settings