Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035042 Camellia sinensis var. sinensis HOM05D008287 ORTHO05D010110 4.0e-11 71.6 32 100.0
Rhsim09G0151900 Rhododendron simsii HOM05D008287 ORTHO05D010110 1.7e-09 66.2 32 84.4
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 8.4e-09 63.9 32 81.2
Potri.010G222400 Populus trichocarpa HOM05D008287 ORTHO05D010110 9.3e-08 60.5 32 78.1
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 9.3e-08 60.5 32 78.1
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 2.7e-07 58.9 32 75.0
CsaV3_5G036300 Cucumis sativus L. HOM05D008287 ORTHO05D010110 2.7e-07 58.9 32 75.0
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 3.5e-07 58.5 32 81.2
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 3.5e-07 58.5 32 78.1
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 4.6e-07 58.2 32 75.0
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 4.6e-07 58.2 29 82.8
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 4.6e-07 58.2 32 75.0
Sabra08G0027300 Salix brachista HOM05D008287 ORTHO05D010110 6.0e-07 57.8 32 78.1
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 7.9e-07 57.4 32 75.0
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 7.9e-07 57.4 32 75.0
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 7.9e-07 57.4 32 75.0
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 1.0e-06 57.0 32 71.9
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 1.0e-06 57.0 32 71.9
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 1.3e-06 56.6 32 75.0
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 1.8e-06 56.2 29 79.3
Nitab4.5_0000575g0160 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.8e-06 56.2 32 71.9
Nitab4.5_0010206g0030 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.8e-06 56.2 32 71.9
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 2.3e-06 55.8 32 71.9
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 2.3e-06 55.8 32 71.9
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 2.3e-06 55.8 32 71.9
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 2.3e-06 55.8 32 75.0
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 3.0e-06 55.5 32 75.0
Cc06_g14360 Coffea canephora HOM05D008287 ORTHO05D010110 3.0e-06 55.5 32 75.0
FAN01G1692 Fragaria x ananassa HOM05D008287 ORTHO05D010110 3.9e-06 55.1 32 71.9
FAN10G2561 Fragaria x ananassa HOM05D008287 ORTHO05D010110 3.9e-06 55.1 32 71.9
FvH4_7g19600 Fragaria vesca HOM05D008287 ORTHO05D010110 6.7e-06 54.3 32 71.9
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 6.7e-06 54.3 32 71.9
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 6.7e-06 54.3 32 68.8
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 8.7e-06 53.9 32 68.8
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 8.7e-06 53.9 28 82.1


User provided reference genes

Program Settings