Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 2.4e-195 685.3 328 100.0
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.9e-176 622.5 328 89.6
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 7.4e-173 610.5 328 87.5
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.5e-170 602.8 328 85.4
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 2.7e-167 592.0 328 85.7
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 3.6e-167 591.7 328 83.8
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 6.1e-167 590.9 329 83.9
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 6.1e-167 590.9 328 83.8
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 1.8e-166 589.3 328 83.2
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 5.1e-166 587.8 328 82.0
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 1.1e-165 586.6 328 83.2
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 2.0e-165 585.9 326 82.2
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.3e-164 583.2 328 81.4
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 4.8e-164 581.3 328 79.9
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 6.3e-164 580.9 325 84.3
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.1e-163 580.1 328 81.4
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 1.1e-163 580.1 327 80.4
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 2.4e-163 578.9 328 80.2
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 3.1e-163 578.6 327 81.7
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 7.0e-163 577.4 326 80.7
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 7.0e-163 577.4 328 79.9
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 9.1e-163 577.0 326 80.7
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 1.6e-162 576.2 326 81.0
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 2.6e-162 575.5 328 79.3
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 2.6e-162 575.5 328 80.5
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 4.5e-162 574.7 328 80.5
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 5.0e-161 571.2 328 79.6
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 6.5e-161 570.9 326 80.7
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 6.5e-161 570.9 328 80.5
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 8.5e-161 570.5 317 83.0
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 8.5e-161 570.5 317 83.0
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 1.1e-160 570.1 328 80.2
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.9e-160 569.3 327 78.3
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 5.5e-160 567.8 325 79.7
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 9.4e-160 567.0 327 78.0
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 1.2e-159 566.6 327 79.8
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 1.6e-159 566.2 325 79.7
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 2.1e-159 565.8 326 81.3
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 6.1e-159 564.3 329 79.9
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 1.0e-158 563.5 326 78.2
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 1.0e-158 563.5 328 78.7
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.4e-158 563.1 329 79.0
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 5.2e-158 561.2 328 78.7
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 6.7e-158 560.8 328 79.3
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.1e-157 560.1 329 78.7
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.1e-157 560.1 328 78.7
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 1.1e-157 560.1 330 79.4
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 1.5e-157 559.7 328 78.7
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.5e-157 559.7 327 78.6
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 4.4e-157 558.1 328 79.3
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 7.5e-157 557.4 330 78.5
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 9.7e-157 557.0 330 79.4
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 9.7e-157 557.0 328 78.0
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 8.2e-156 553.9 330 78.5
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 1.4e-155 553.1 330 78.2
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 1.8e-155 552.7 330 79.1
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 7.0e-155 550.8 346 76.3
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 1.2e-154 550.1 328 78.0
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 4.5e-154 548.1 327 77.7
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 5.9e-154 547.7 341 76.2
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.3e-153 546.6 328 79.0
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 2.9e-153 545.4 312 78.2
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 3.8e-153 545.0 338 76.6
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 5.0e-153 544.7 327 76.1
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.1e-152 543.5 330 77.6
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.9e-152 542.7 328 76.2
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 2.1e-151 539.3 335 74.0
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 2.7e-151 538.9 341 76.0
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 6.1e-151 537.7 318 77.4
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 8.0e-151 537.3 326 76.7
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 8.0e-151 537.3 326 77.0
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 2.3e-150 535.8 328 76.2
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 4.0e-150 535.0 325 74.8
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 1.4e-147 526.6 313 78.3
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 2.4e-147 525.8 328 76.2
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 3.1e-147 525.4 310 78.1
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 7.7e-146 520.8 326 75.2
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 5.0e-145 518.1 328 73.2
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 6.5e-145 517.7 328 73.2
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 8.5e-145 517.3 328 72.3
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 5.5e-144 514.6 328 70.4
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 1.0e-142 510.4 328 72.0
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 2.0e-141 506.1 328 73.8
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 3.4e-141 505.4 312 75.6
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 3.7e-140 501.9 315 74.0
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 6.3e-140 501.1 328 72.0
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.2e-138 496.9 328 71.0
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 7.8e-130 467.6 253 83.4
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.9e-128 463.0 325 64.3
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.3e-128 462.2 325 64.0
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.6e-127 459.9 317 70.3
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 2.8e-127 459.1 255 83.1
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 3.7e-124 448.7 254 81.5
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 6.4e-124 448.0 328 63.1
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 5.4e-123 444.9 256 80.1
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 6.0e-122 441.4 277 74.7
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 6.0e-122 441.4 306 65.4
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 4.7e-119 431.8 309 63.1
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 8.9e-118 427.6 254 78.7
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 1.2e-117 427.2 328 63.1
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.9e-115 419.9 241 78.8
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 1.1e-110 404.1 309 58.9
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 3.1e-110 402.5 317 58.0
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 5.2e-102 375.2 220 80.9
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 1.6e-95 353.6 198 82.3
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.2e-90 337.4 312 54.2
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 2.8e-79 299.7 166 78.3
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 3.1e-62 243.0 143 81.8
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 2.2e-55 220.3 132 77.3
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 1.4e-46 191.0 142 58.5
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 5.3e-46 189.1 307 37.8
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 4.5e-45 186.0 115 73.0
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 4.2e-43 179.5 293 35.8
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 4.1e-38 162.9 308 32.8
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 9.8e-32 141.7 111 66.7
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 1.7e-31 141.0 109 56.0
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 7.0e-30 135.6 133 55.6
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 9.1e-30 135.2 78 83.3
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 1.9e-27 127.5 82 67.1
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.4e-25 121.3 68 72.1
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 1.6e-21 107.8 72 68.1
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 5.0e-20 102.8 58 77.6
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.7e-15 87.8 69 58.0
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.9e-11 74.3 61 63.9
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.8e-09 67.8 47 68.1
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 4.4e-08 63.2 39 82.1
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.3e-07 61.6 40 62.5


User provided reference genes

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