Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 2.2e-266 921.8 469 100.0
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 7.5e-195 684.1 460 77.2
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 1.3e-191 673.3 428 80.6
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 3.2e-185 652.1 430 78.8
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 8.1e-181 637.5 461 71.8
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 6.9e-180 634.4 461 72.0
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.4e-177 624.8 462 72.3
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 1.3e-175 620.2 461 69.8
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 7.3e-174 614.4 499 66.1
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 9.6e-174 614.0 461 69.6
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 6.9e-172 607.8 475 67.8
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 5.8e-171 604.7 461 67.7
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 3.5e-168 595.5 461 65.9
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 2.1e-165 586.3 461 64.6
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 2.8e-165 585.9 461 64.9
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 1.1e-164 583.9 462 64.5
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 7.6e-163 577.8 479 64.3
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 1.3e-162 577.0 461 66.4
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.2e-162 576.2 463 65.7
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 2.2e-162 576.2 461 65.9
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 3.8e-162 575.5 460 64.6
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.9e-161 573.2 461 65.7
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 3.2e-161 572.4 461 67.0
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 9.3e-161 570.9 501 60.7
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 2.1e-160 569.7 463 66.7
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 4.6e-160 568.5 469 61.2
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 7.9e-160 567.8 461 64.9
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.0e-159 567.4 461 64.2
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 1.3e-159 567.0 469 64.6
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 1.8e-159 566.6 460 63.7
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 1.8e-159 566.6 462 65.6
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 2.3e-159 566.2 446 64.3
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 1.1e-158 563.9 461 64.4
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 1.1e-158 563.9 446 65.5
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.5e-158 563.5 469 61.8
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 3.3e-158 562.4 446 67.9
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 1.3e-157 560.5 450 65.6
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.8e-157 559.3 467 61.9
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 6.2e-157 558.1 461 62.9
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 4.0e-156 555.4 476 62.0
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 2.0e-155 553.1 473 63.0
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 4.5e-155 552.0 470 63.2
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 4.5e-155 552.0 462 61.5
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 4.5e-155 552.0 467 60.6
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 5.8e-155 551.6 462 63.0
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 2.9e-154 549.3 469 60.8
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 3.8e-154 548.9 460 60.9
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 8.4e-154 547.7 450 64.7
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.4e-153 547.0 468 59.0
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 7.1e-153 544.7 471 60.9
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 9.3e-153 544.3 410 70.2
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 9.3e-153 544.3 462 60.8
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.6e-152 543.5 464 61.9
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.6e-152 543.5 464 61.9
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 1.6e-152 543.5 464 61.9
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 2.1e-152 543.1 463 61.1
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 3.5e-152 542.3 460 62.6
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 7.9e-152 541.2 462 61.5
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 7.9e-152 541.2 468 60.0
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 7.9e-152 541.2 461 61.4
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 1.0e-151 540.8 465 60.9
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 3.0e-151 539.3 462 61.0
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 3.0e-151 539.3 464 61.6
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 3.9e-151 538.9 467 60.2
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 1.9e-150 536.6 461 61.0
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 7.4e-150 534.6 463 60.7
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 1.3e-149 533.9 460 59.3
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 2.2e-149 533.1 460 61.1
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 1.8e-148 530.0 464 59.9
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.8e-148 530.0 463 61.8
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.0e-147 526.6 492 59.1
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 5.9e-147 525.0 462 60.4
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 2.2e-146 523.1 469 59.5
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 3.8e-146 522.3 461 60.3
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 3.8e-146 522.3 420 64.5
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 8.5e-146 521.2 461 60.1
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 8.5e-146 521.2 461 60.1
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 1.1e-145 520.8 503 56.5
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 1.4e-145 520.4 510 56.9
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.2e-145 519.2 471 60.3
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 5.5e-145 518.5 461 59.9
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 5.5e-145 518.5 463 59.8
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 9.4e-145 517.7 472 59.1
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 1.2e-144 517.3 462 60.2
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 2.1e-144 516.5 451 61.6
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 3.0e-143 512.7 531 54.0
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 8.8e-143 511.1 461 59.0
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 5.7e-142 508.4 449 60.1
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.7e-141 506.9 548 52.7
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 1.0e-135 487.6 467 56.7
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 9.1e-132 474.6 409 62.1
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 5.5e-129 465.3 483 53.0
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 7.2e-129 464.9 375 65.1
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 1.2e-128 464.2 462 52.8
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 2.6e-123 446.4 470 55.5
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.5e-121 439.9 469 53.1
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 3.7e-117 426.0 406 56.7
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 4.8e-109 399.1 293 72.7
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 5.4e-108 395.6 377 58.9
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 9.5e-105 384.8 479 44.7
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 2.8e-104 383.3 419 50.4
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 2.2e-101 373.6 346 59.0
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 3.4e-94 349.7 461 44.9
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 2.0e-91 340.5 379 49.3
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 3.2e-84 316.6 261 63.2
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 7.1e-84 315.5 478 39.7
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 9.5e-81 305.1 323 53.3
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 1.7e-77 294.3 422 42.7
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 1.4e-76 291.2 385 44.7
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 7.1e-76 288.9 275 58.9
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 7.8e-75 285.4 196 72.4
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 2.3e-66 257.3 371 43.9
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 2.1e-64 250.8 446 34.5
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.5e-62 244.6 185 68.1
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 2.0e-54 217.6 291 42.3
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 1.8e-50 204.5 135 74.1
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 4.8e-48 196.4 467 30.8
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.8e-46 189.5 130 76.2
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.8e-46 189.5 130 76.2
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 2.1e-43 181.0 136 66.2
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 1.6e-35 154.8 292 38.4
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.8e-32 144.1 185 45.9
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 1.1e-25 122.1 219 37.9
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 4.8e-24 116.7 60 88.3
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 1.4e-23 115.2 457 28.9
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.5e-20 104.4 63 76.2
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.6e-19 101.7 53 83.0
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 7.9e-19 99.4 113 46.0
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 8.8e-18 95.9 61 68.9
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.3e-16 89.7 65 67.7
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 8.8e-10 69.3 57 64.9
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 8.8e-10 69.3 57 64.9
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 3.3e-09 67.4 74 44.6


User provided reference genes

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