Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035026 Camellia sinensis var. sinensis HOM05D002801 ORTHO05D003002 6.4e-41 170.2 82 100.0
CSS0037052 Camellia sinensis var. sinensis HOM05D002801 ORTHO05D003002 1.0e-17 93.2 68 72.1
Dinv35783 Davidia involucrata HOM05D002801 ORTHO05D003002 1.3e-14 82.8 70 62.9
Actinidia08779 Actinidia chinensis HOM05D002801 ORTHO05D003002 2.3e-14 82.0 69 63.8
Rhsim03G0092600 Rhododendron simsii HOM05D002801 ORTHO05D003002 6.7e-14 80.5 73 60.3
vmacro07286 Vaccinium macrocarpon HOM05D002801 ORTHO05D003002 4.3e-13 77.8 73 60.3
Hma1.2p1_0205F.1_g087110 Hydrangea macrophylla HOM05D002801 ORTHO05D003002 1.5e-10 69.3 73 58.9
GSVIVG01025725001 Vitis vinifera HOM05D002801 ORTHO05D003002 1.5e-10 69.3 68 55.9
HanXRQChr01g0027631 Helianthus annuus HOM05D002801 ORTHO05D003002 2.6e-10 68.6 66 56.1
CiPaw.10G130300 Carya illinoinensis HOM05D002801 ORTHO05D003002 7.6e-10 67.0 69 58.0
Dinv37307 Davidia involucrata HOM05D002801 ORTHO05D003002 7.6e-10 67.0 65 60.0
Nitab4.5_0002632g0070 Nicotiana tabacum HOM05D002801 ORTHO05D003002 1.0e-09 66.6 103 38.8
QL07p043643 Quercus lobata HOM05D002801 ORTHO05D003002 2.9e-09 65.1 69 56.5
Nn2g11575 Nelumbo nucifera HOM05D002801 ORTHO05D003002 3.8e-09 64.7 69 55.1
HanXRQChr02g0053371 Helianthus annuus HOM05D002801 ORTHO05D003002 5.0e-09 64.3 66 59.1
TAR633G0396 Trochodendron aralioides HOM05D002801 ORTHO05D003002 5.0e-09 64.3 67 55.2
MSTRG.26694 Avicennia marina HOM05D002801 ORTHO05D003002 6.5e-09 63.9 70 54.3
Cc04_g12180 Coffea canephora HOM05D002801 ORTHO05D003002 1.1e-08 63.2 64 51.6
Lj2A116G73 Lonicera japonica HOM05D002801 ORTHO05D003002 1.9e-08 62.4 60 53.3
Nitab4.5_0003861g0040 Nicotiana tabacum HOM05D002801 ORTHO05D003002 1.9e-08 62.4 103 37.9
TAR636G1313 Trochodendron aralioides HOM05D002801 ORTHO05D003002 1.9e-08 62.4 71 50.7
Ciclev10011099m.g Citrus clementina HOM05D002801 ORTHO05D003002 3.2e-08 61.6 71 46.5
ECA238G4143 Erigeron canadensis HOM05D002801 ORTHO05D003002 4.2e-08 61.2 52 61.5
Glyma.02G048100 Glycine max HOM05D002801 ORTHO05D003002 5.5e-08 60.8 55 58.2
CAN.G900.43 Capsicum annuum HOM05D002801 ORTHO05D003002 7.1e-08 60.5 103 36.9
ECA248G2038 Erigeron canadensis HOM05D002801 ORTHO05D003002 1.6e-07 59.3 65 49.2
CiPaw.10G130400 Carya illinoinensis HOM05D002801 ORTHO05D003002 2.1e-07 58.9 69 52.2
Potri.006G125400 Populus trichocarpa HOM05D002801 ORTHO05D003002 2.1e-07 58.9 72 48.6
Thecc.05G064900 Theobroma cacao HOM05D002801 ORTHO05D003002 2.1e-07 58.9 69 55.1
SalBow5G1472 Salvia bowleyana HOM05D002801 ORTHO05D003002 2.7e-07 58.5 65 52.3
SalBow5G4156 Salvia bowleyana HOM05D002801 ORTHO05D003002 2.7e-07 58.5 65 52.3
Glyma.16G128300 Glycine max HOM05D002801 ORTHO05D003002 3.5e-07 58.2 55 56.4
arahy.Tifrunner.gnm1.ann1.IM29MK Arachis hypogaea HOM05D002801 ORTHO05D003002 4.6e-07 57.8 71 53.5
CDE06G1853 Ceratophyllum demersum HOM05D002801 ORTHO05D003002 4.6e-07 57.8 51 60.8
Sc02g0001680 Simmondsia chinensis HOM05D002801 ORTHO05D003002 4.6e-07 57.8 69 47.8
Duzib128G1402 Durio zibethinus HOM05D002801 ORTHO05D003002 6.1e-07 57.4 69 52.2
arahy.Tifrunner.gnm1.ann1.KV6AVL Arachis hypogaea HOM05D002801 ORTHO05D003002 7.9e-07 57.0 31 87.1
CANSAT80G2908 Cannabis sativa HOM05D002801 ORTHO05D003002 7.9e-07 57.0 29 89.7
Haze_20554 Corylus avellana HOM05D002801 ORTHO05D003002 7.9e-07 57.0 64 51.6
Duzib093G0446 Durio zibethinus HOM05D002801 ORTHO05D003002 7.9e-07 57.0 55 56.4
Lj4g0021696 Lotus japonicus HOM05D002801 ORTHO05D003002 7.9e-07 57.0 31 87.1
Phvul.003G261500 Phaseolus vulgaris HOM05D002801 ORTHO05D003002 7.9e-07 57.0 31 87.1
Psat4g113080 Pisum sativum HOM05D002801 ORTHO05D003002 7.9e-07 57.0 31 87.1
TPR.G24800 Trifolium pratense HOM05D002801 ORTHO05D003002 7.9e-07 57.0 31 87.1
VMungo0251G2590 Vigna mungo HOM05D002801 ORTHO05D003002 7.9e-07 57.0 31 87.1
Atru.chr8.1823 Acer truncatum HOM05D002801 ORTHO05D003002 1.0e-06 56.6 67 52.2
Cfa017598 Carpinus fangiana HOM05D002801 ORTHO05D003002 1.0e-06 56.6 64 53.1
Potri.016G091700 Populus trichocarpa HOM05D002801 ORTHO05D003002 1.0e-06 56.6 30 86.7
Sed0017434 Sechium edule HOM05D002801 ORTHO05D003002 1.0e-06 56.6 54 57.4
Eucgr.A01690 Eucalyptus grandis HOM05D002801 ORTHO05D003002 1.3e-06 56.2 69 46.4
Peaxi162Scf00701g00031 Petunia axillaris HOM05D002801 ORTHO05D003002 1.3e-06 56.2 103 35.9
Aqoxy1G00134 Aquilegia oxysepala HOM05D002801 ORTHO05D003002 1.8e-06 55.8 37 73.0
Ca_22518_v3 Cicer arietinum L. HOM05D002801 ORTHO05D003002 1.8e-06 55.8 29 89.7
Gohir.A01G214500 Gossypium hirsutum HOM05D002801 ORTHO05D003002 1.8e-06 55.8 29 89.7
Gohir.A04G072200 Gossypium hirsutum HOM05D002801 ORTHO05D003002 1.8e-06 55.8 29 89.7
Gohir.D01G203000 Gossypium hirsutum HOM05D002801 ORTHO05D003002 1.8e-06 55.8 29 89.7
Gohir.D04G110700 Gossypium hirsutum HOM05D002801 ORTHO05D003002 1.8e-06 55.8 29 89.7
Gorai.009G414900 Gossypium raimondii HOM05D002801 ORTHO05D003002 1.8e-06 55.8 29 89.7
Manes.08G009700 Manihot esculenta HOM05D002801 ORTHO05D003002 2.3e-06 55.5 69 47.8
Oeu040375.1 Olea europaea HOM05D002801 ORTHO05D003002 2.3e-06 55.5 64 48.4
EL10Ac7g16619 Beta vulgaris HOM05D002801 ORTHO05D003002 3.0e-06 55.1 46 60.9
BcaB01g03805 Brassica carinata HOM05D002801 ORTHO05D003002 3.0e-06 55.1 34 76.5
AUR62044224 Chenopodium quinoa HOM05D002801 ORTHO05D003002 3.0e-06 55.1 42 66.7
Medtr8g069965 Medicago truncatula HOM05D002801 ORTHO05D003002 3.0e-06 55.1 31 83.9
CDE02G0847 Ceratophyllum demersum HOM05D002801 ORTHO05D003002 3.9e-06 54.7 50 60.0
MELO3C009350.2 Cucumis melo HOM05D002801 ORTHO05D003002 3.9e-06 54.7 29 86.2
Manes.09G067140 Manihot esculenta HOM05D002801 ORTHO05D003002 3.9e-06 54.7 70 50.0
DCAR_017687 Daucus carota HOM05D002801 ORTHO05D003002 5.1e-06 54.3 28 89.3
Lalb_Chr16g0391251 Lupinus albus HOM05D002801 ORTHO05D003002 5.1e-06 54.3 31 83.9
PGR004G0677 Punica granatum HOM05D002801 ORTHO05D003002 5.1e-06 54.3 34 73.5
Aa31LG5G22170 Aethionema arabicum HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
AL4G33200 Arabidopsis lyrata HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
AT2G36960 Arabidopsis thaliana HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
BcaB02g09317 Brassica carinata HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
BcaC02g11818 Brassica carinata HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
A05p08890 Brassica napus HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
C04p11020 Brassica napus HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
BolC4t22748H Brassica oleracea HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
BraA05t19854Z Brassica rapa HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
Carub.0004s1880 Capsella rubella HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
CARHR131420 Cardamine hirsuta HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
Cpa.g.sc56.26 Carica papaya HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
Thhalv10016298m.g Eutrema salsugineum HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
Lalb_Chr09g0333141 Lupinus albus HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
Sp4g19240 Schrenkiella parvula HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
THA.LOC104806477 Tarenaya hassleriana HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
TWI53G0691 Tripterygium wilfordii HOM05D002801 ORTHO05D003002 6.7e-06 53.9 29 86.2
ClCG10G020190 Citrullus lanatus HOM05D002801 ORTHO05D003002 8.7e-06 53.5 29 82.8
CsaV3_3G035910 Cucumis sativus L. HOM05D002801 ORTHO05D003002 8.7e-06 53.5 29 82.8
Lsat_1_v5_gn_6_11100 Lactuca sativa HOM05D002801 ORTHO05D003002 8.7e-06 53.5 48 58.3


User provided reference genes

Program Settings