Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.7e-67 259.2 131 100.0
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.6e-62 242.7 131 93.9
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 5.2e-61 237.7 131 90.8
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 5.2e-61 237.7 131 90.8
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 5.2e-61 237.7 131 90.8
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 5.2e-61 237.7 131 90.8
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 5.8e-60 234.2 131 90.1
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 8.3e-59 230.3 131 88.5
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 1.4e-58 229.6 131 88.5
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 7.1e-58 227.3 131 87.0
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 7.1e-58 227.3 131 85.5
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 7.1e-58 227.3 131 87.0
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 9.2e-58 226.9 134 89.6
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 2.1e-57 225.7 133 85.7
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 2.7e-57 225.3 132 84.8
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 2.7e-57 225.3 131 87.8
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 3.5e-57 224.9 131 84.0
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 4.6e-57 224.6 131 85.5
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 6.0e-57 224.2 131 85.5
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 6.0e-57 224.2 131 86.3
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 6.0e-57 224.2 131 86.3
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 7.8e-57 223.8 131 87.8
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 1.0e-56 223.4 131 86.3
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 1.3e-56 223.0 131 84.0
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 1.3e-56 223.0 133 85.0
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.3e-56 223.0 131 85.5
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 1.3e-56 223.0 131 82.4
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 1.3e-56 223.0 131 86.3
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.7e-56 222.6 131 85.5
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 3.0e-56 221.9 131 84.0
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 3.9e-56 221.5 131 85.5
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.1e-56 221.1 131 84.7
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 8.6e-56 220.3 131 83.2
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 8.6e-56 220.3 131 83.2
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.1e-55 219.9 131 85.5
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 1.1e-55 219.9 134 82.8
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 1.5e-55 219.5 131 84.7
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.5e-55 219.5 132 84.8
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 2.5e-55 218.8 132 82.6
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 3.3e-55 218.4 131 84.7
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 4.3e-55 218.0 132 83.3
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 5.6e-55 217.6 131 80.2
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 9.5e-55 216.9 131 82.4
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 9.5e-55 216.9 131 81.7
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 9.5e-55 216.9 131 84.7
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.2e-54 216.5 131 82.4
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 1.2e-54 216.5 131 82.4
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 1.6e-54 216.1 131 81.7
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 2.1e-54 215.7 134 80.6
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 2.1e-54 215.7 130 81.5
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 2.8e-54 215.3 132 82.6
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 2.8e-54 215.3 132 81.8
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 2.8e-54 215.3 131 80.9
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 2.8e-54 215.3 134 78.4
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 4.7e-54 214.5 134 83.6
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 6.2e-54 214.2 131 81.7
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.1e-53 213.4 133 79.7
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 1.1e-53 213.4 131 80.2
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 1.1e-53 213.4 131 80.2
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 1.8e-53 212.6 131 79.4
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 1.8e-53 212.6 131 79.4
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.8e-53 212.6 131 80.2
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 3.1e-53 211.8 133 78.9
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 3.1e-53 211.8 131 79.4
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.1e-53 211.8 130 83.1
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 3.1e-53 211.8 131 80.9
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 4.0e-53 211.5 133 78.2
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 4.0e-53 211.5 131 79.4
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 4.0e-53 211.5 129 82.2
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 5.2e-53 211.1 131 82.4
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 5.2e-53 211.1 129 82.2
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 5.2e-53 211.1 129 82.2
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 5.2e-53 211.1 129 81.4
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 6.8e-53 210.7 133 78.9
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 6.8e-53 210.7 131 79.4
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 6.8e-53 210.7 119 87.4
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 8.9e-53 210.3 129 82.2
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 1.5e-52 209.5 133 77.4
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 1.5e-52 209.5 133 77.4
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 1.5e-52 209.5 127 80.3
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 2.0e-52 209.1 133 77.4
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.0e-52 209.1 131 82.4
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 2.6e-52 208.8 133 76.7
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 2.6e-52 208.8 129 80.6
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 3.4e-52 208.4 131 77.9
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 3.4e-52 208.4 131 77.1
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 4.4e-52 208.0 132 79.5
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 5.8e-52 207.6 133 76.7
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 5.8e-52 207.6 131 77.9
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 7.6e-52 207.2 131 78.6
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 1.3e-51 206.5 133 77.4
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 1.3e-51 206.5 131 78.6
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 1.3e-51 206.5 131 79.4
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.7e-51 206.1 133 77.4
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 1.7e-51 206.1 134 76.1
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 1.7e-51 206.1 134 76.1
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 1.7e-51 206.1 131 80.2
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 1.7e-51 206.1 127 79.5
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 2.2e-51 205.7 134 76.1
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 2.2e-51 205.7 134 76.1
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 2.2e-51 205.7 134 76.1
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.2e-51 205.7 131 80.2
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.9e-51 205.3 131 73.3
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 2.9e-51 205.3 133 81.2
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 3.7e-51 204.9 131 80.2
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 6.4e-51 204.1 131 74.8
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 6.4e-51 204.1 133 76.7
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 1.1e-50 203.4 131 74.0
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 1.1e-50 203.4 133 79.7
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 1.4e-50 203.0 134 76.1
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 1.4e-50 203.0 131 74.0
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 1.9e-50 202.6 131 75.6
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 2.4e-50 202.2 134 75.4
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 2.4e-50 202.2 131 75.6
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 4.1e-50 201.4 131 71.8
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 5.4e-50 201.1 131 76.3
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 5.4e-50 201.1 146 75.3
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 9.2e-50 200.3 131 74.8
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.2e-49 199.9 131 75.6
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.6e-49 199.5 123 82.1
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.6e-49 199.5 131 75.6
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.6e-49 199.5 132 75.0
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.6e-49 199.5 133 75.9
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 2.1e-49 199.1 131 75.6
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 6.0e-49 197.6 118 81.4
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 3.0e-48 195.3 110 82.7
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 3.9e-48 194.9 127 72.4
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 3.9e-48 194.9 120 75.8
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 3.9e-48 194.9 131 72.5
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 6.6e-48 194.1 131 71.8
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 8.6e-48 193.7 131 73.3
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 2.5e-47 192.2 131 71.0
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 4.3e-47 191.4 125 80.0
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 9.6e-47 190.3 131 69.5
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 9.6e-47 190.3 131 69.5
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 9.6e-47 190.3 120 80.0
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 1.4e-45 186.4 139 73.4
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 1.8e-45 186.0 128 71.9
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 1.8e-45 186.0 128 73.4
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 1.5e-44 183.0 123 73.2
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 2.0e-44 182.6 123 73.2
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 2.2e-43 179.1 140 66.4
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 5.1e-40 167.9 131 63.4
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 8.7e-40 167.2 131 60.3
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 1.3e-38 163.3 130 63.8
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 8.1e-38 160.6 91 83.5
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 9.0e-37 157.1 131 56.5
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 1.2e-36 156.8 115 66.1
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 1.2e-33 146.7 125 60.0
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 6.0e-33 144.4 120 55.8
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.6e-30 136.3 85 85.9
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 5.3e-29 131.3 77 83.1
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 1.4e-26 123.2 78 73.1
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 5.5e-26 121.3 75 78.7
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.6e-25 119.8 77 75.3
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.3e-24 116.7 73 79.5
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 8.7e-24 114.0 76 73.7
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 3.7e-22 108.6 78 65.4
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 4.0e-21 105.1 60 93.3
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 9.3e-18 94.0 56 78.6
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 1.5e-12 76.6 50 74.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 1.7e-11 73.2 45 71.1
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 1.9e-10 69.7 95 35.8
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 8.7e-08 60.8 43 65.1


User provided reference genes

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