Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035024 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.8e-27 125.2 61 100.0
Oeu063785.1 Olea europaea HOM05D007733 ORTHO05D009786 5.9e-23 110.2 61 88.5
CDE04G2892 Ceratophyllum demersum HOM05D007733 ORTHO05D009786 2.2e-22 108.2 61 83.6
CiPaw.09G048000 Carya illinoinensis HOM05D007733 ORTHO05D009786 2.9e-22 107.8 60 85.0
Hma1.2p1_0757F.1_g213300 Hydrangea macrophylla HOM05D007733 ORTHO05D009786 2.9e-22 107.8 58 91.4
MD00G1018100 Malus domestica HOM05D007733 ORTHO05D009786 2.9e-22 107.8 59 84.7
CsaV3_4G029620 Cucumis sativus L. HOM05D007733 ORTHO05D009786 5.0e-22 107.1 55 89.1
Sed0021033 Sechium edule HOM05D007733 ORTHO05D009786 6.5e-22 106.7 55 87.3
Peaxi162Scf00696g00026 Petunia axillaris HOM05D007733 ORTHO05D009786 1.4e-21 105.5 53 94.3
CSS0016184 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.9e-21 105.1 61 85.2
CSS0036430 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.9e-21 105.1 61 85.2
Thecc.01G129600 Theobroma cacao HOM05D007733 ORTHO05D009786 2.5e-21 104.8 61 86.9
Prupe.7G032300 Prunus persica HOM05D007733 ORTHO05D009786 3.2e-21 104.4 59 83.1
Glyma.12G186000 Glycine max HOM05D007733 ORTHO05D009786 4.2e-21 104.0 57 82.5
MELO3C019082.2 Cucumis melo HOM05D007733 ORTHO05D009786 5.5e-21 103.6 55 85.5
MD12G1095600 Malus domestica HOM05D007733 ORTHO05D009786 5.5e-21 103.6 59 81.4
SGA_v2.0_scaffold3G01720 Striga asiatica HOM05D007733 ORTHO05D009786 7.2e-21 103.2 56 85.7
FAN06G4775 Fragaria x ananassa HOM05D007733 ORTHO05D009786 9.3e-21 102.8 57 86.0
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 9.3e-21 102.8 57 86.0
CAN.G960.60 Capsicum annuum HOM05D007733 ORTHO05D009786 1.2e-20 102.4 59 79.7
PGSC0003DMG401008361 Solanum tuberosum HOM05D007733 ORTHO05D009786 1.2e-20 102.4 59 79.7
Atru.chr1.1436 Acer truncatum HOM05D007733 ORTHO05D009786 1.6e-20 102.1 59 83.1
Cc06_g19360 Coffea canephora HOM05D007733 ORTHO05D009786 1.6e-20 102.1 59 83.1
Glyma.13G315500 Glycine max HOM05D007733 ORTHO05D009786 1.6e-20 102.1 57 80.7
Lalb_Chr06g0173691 Lupinus albus HOM05D007733 ORTHO05D009786 2.7e-20 101.3 57 82.5
Os11g0136701 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 2.7e-20 101.3 60 76.7
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 3.6e-20 100.9 55 87.3
Manes.01G136000 Manihot esculenta HOM05D007733 ORTHO05D009786 4.6e-20 100.5 57 84.2
Solyc10g078420.2 Solanum lycopersicum HOM05D007733 ORTHO05D009786 4.6e-20 100.5 59 78.0
SGA_v2.0_scaffold105G30286 Striga asiatica HOM05D007733 ORTHO05D009786 4.6e-20 100.5 55 85.5
RcHm_v2.0_Chr1g0328381 Rosa chinensis HOM05D007733 ORTHO05D009786 7.9e-20 99.8 59 83.1
arahy.Tifrunner.gnm1.ann1.2TE5XM Arachis hypogaea HOM05D007733 ORTHO05D009786 1.0e-19 99.4 59 76.3
Gohir.A11G247101 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.0e-19 99.4 59 79.7
Potri.016G036400 Populus trichocarpa HOM05D007733 ORTHO05D009786 1.3e-19 99.0 58 79.3
TWI74G1577 Tripterygium wilfordii HOM05D007733 ORTHO05D009786 1.3e-19 99.0 60 78.3
Phvul.005G122800 Phaseolus vulgaris HOM05D007733 ORTHO05D009786 1.8e-19 98.6 57 78.9
Os12g0133600 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 3.0e-19 97.8 60 73.3
Potri.006G039100 Populus trichocarpa HOM05D007733 ORTHO05D009786 3.0e-19 97.8 58 82.8
Psat4g102040 Pisum sativum HOM05D007733 ORTHO05D009786 3.9e-19 97.4 52 86.5
RcHm_v2.0_Chr1g0328511 Rosa chinensis HOM05D007733 ORTHO05D009786 3.9e-19 97.4 59 79.7
Duzib264G0681 Durio zibethinus HOM05D007733 ORTHO05D009786 6.7e-19 96.7 59 81.4
PSO384G4410 Papaver somniferum HOM05D007733 ORTHO05D009786 1.5e-18 95.5 57 73.7
PGR031G3673 Punica granatum HOM05D007733 ORTHO05D009786 1.5e-18 95.5 63 74.6
RcHm_v2.0_Chr1g0328411 Rosa chinensis HOM05D007733 ORTHO05D009786 1.5e-18 95.5 59 79.7
Migut.J01653 Erythranthe guttata HOM05D007733 ORTHO05D009786 1.9e-18 95.1 61 75.4
BcaC03g13244 Brassica carinata HOM05D007733 ORTHO05D009786 3.3e-18 94.4 60 73.3
C02p03760 Brassica napus HOM05D007733 ORTHO05D009786 3.3e-18 94.4 60 73.3
BolC2t06337H Brassica oleracea HOM05D007733 ORTHO05D009786 3.3e-18 94.4 60 73.3
BcaB05g21564 Brassica carinata HOM05D007733 ORTHO05D009786 5.7e-18 93.6 60 73.3
CANSAT64G1685 Cannabis sativa HOM05D007733 ORTHO05D009786 7.4e-18 93.2 58 75.9
THA.LOC104819346 Tarenaya hassleriana HOM05D007733 ORTHO05D009786 9.7e-18 92.8 58 74.1
Medtr1g069390 Medicago truncatula HOM05D007733 ORTHO05D009786 1.3e-17 92.4 52 80.8
Sp6g34080 Schrenkiella parvula HOM05D007733 ORTHO05D009786 1.6e-17 92.0 54 77.8
BraA02t04971Z Brassica rapa HOM05D007733 ORTHO05D009786 2.2e-17 91.7 51 82.4
Aqoxy1G00180 Aquilegia oxysepala HOM05D007733 ORTHO05D009786 2.8e-17 91.3 52 82.7
Thhalv10015230m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 2.8e-17 91.3 59 72.9
Aa31LG1G18010 Aethionema arabicum HOM05D007733 ORTHO05D009786 3.7e-17 90.9 61 70.5
AL6G19610 Arabidopsis lyrata HOM05D007733 ORTHO05D009786 3.7e-17 90.9 54 77.8
AT5G09225 Arabidopsis thaliana HOM05D007733 ORTHO05D009786 3.7e-17 90.9 54 77.8
Lsat_1_v5_gn_5_157040 Lactuca sativa HOM05D007733 ORTHO05D009786 3.7e-17 90.9 52 86.5
Carub.0006s0778 Capsella rubella HOM05D007733 ORTHO05D009786 4.8e-17 90.5 54 77.8
CARHR204200 Cardamine hirsuta HOM05D007733 ORTHO05D009786 4.8e-17 90.5 54 77.8
arahy.Tifrunner.gnm1.ann1.05QC9F Arachis hypogaea HOM05D007733 ORTHO05D009786 8.2e-17 89.7 56 73.2
Nitab4.5_0000812g0080 Nicotiana tabacum HOM05D007733 ORTHO05D009786 1.8e-16 88.6 41 95.1
Nitab4.5_0004588g0050 Nicotiana tabacum HOM05D007733 ORTHO05D009786 3.1e-16 87.8 42 90.5
Peaxi162Scf00848g00014 Petunia axillaris HOM05D007733 ORTHO05D009786 3.1e-16 87.8 41 92.7
Thhalv10005241m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 4.1e-16 87.4 61 68.9
MBI19_g20791_MAGBIO Magnolia biondii HOM05D007733 ORTHO05D009786 1.2e-15 85.9 45 82.2
Hund24585 Selenicereus undatus HOM05D007733 ORTHO05D009786 1.2e-15 85.9 42 88.1
GSVIVG01004069001 Vitis vinifera HOM05D007733 ORTHO05D009786 1.2e-15 85.9 53 75.5
Manes.02G094502 Manihot esculenta HOM05D007733 ORTHO05D009786 2.0e-15 85.1 41 92.7
vmacro07790 Vaccinium macrocarpon HOM05D007733 ORTHO05D009786 4.5e-15 84.0 46 87.0
COL.COLO4_35702 Corchorus olitorius HOM05D007733 ORTHO05D009786 5.9e-15 83.6 41 90.2
Peaxi162Scf00696g00024 Petunia axillaris HOM05D007733 ORTHO05D009786 5.9e-15 83.6 39 94.9
BcaB02g09770 Brassica carinata HOM05D007733 ORTHO05D009786 7.7e-15 83.2 61 63.9
BraA06t25997Z Brassica rapa HOM05D007733 ORTHO05D009786 7.7e-15 83.2 61 65.6
Oeu022972.2 Olea europaea HOM05D007733 ORTHO05D009786 1.0e-14 82.8 41 90.2
FAN01G2779 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.3e-14 82.4 41 90.2
Gohir.D11G257301 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.7e-14 82.0 41 87.8
Gorai.007G275700 Gossypium raimondii HOM05D007733 ORTHO05D009786 1.7e-14 82.0 41 87.8
HanXRQChr01g0008231 Helianthus annuus HOM05D007733 ORTHO05D009786 1.7e-14 82.0 42 85.7
Sc19g0008160 Simmondsia chinensis HOM05D007733 ORTHO05D009786 2.2e-14 81.6 41 90.2
BcaC01g02637 Brassica carinata HOM05D007733 ORTHO05D009786 6.5e-14 80.1 60 61.7
A06p30480 Brassica napus HOM05D007733 ORTHO05D009786 8.5e-14 79.7 61 63.9
Zm00001eb093420 Zea mays HOM05D007733 ORTHO05D009786 2.1e-12 75.1 41 75.6
SalBow7G0067 Salvia bowleyana HOM05D007733 ORTHO05D009786 4.6e-12 73.9 44 77.3
DCAR_027120 Daucus carota HOM05D000958 ORTHO05D000786 1.8e-11 72.0 34 94.1
HPP92_015863 Vanilla planifolia HOM05D007733 ORTHO05D009786 3.9e-11 70.9 40 77.5
HPP92_015865 Vanilla planifolia HOM05D007733 ORTHO05D009786 3.9e-11 70.9 40 77.5
RcHm_v2.0_Chr1g0328311 Rosa chinensis HOM05D007733 ORTHO05D009786 3.1e-08 61.2 34 82.4
Mapoly0009s0018 Marchantia polymorpha HOM05D007733 ORTHO05D009786 6.9e-08 60.1 47 57.4
Gohir.A11G247151 Gossypium hirsutum HOM05D007733 ORTHO05D009786 9.1e-08 59.7 30 90.0
CBR_g21252 Chara braunii HOM05D007733 ORTHO05D009786 2.6e-07 58.2 57 45.6


User provided reference genes

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