Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034991 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.5e-127 458.8 228 100.0
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.4e-23 112.5 154 39.6
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 9.8e-23 111.3 154 40.3
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 9.8e-23 111.3 154 40.3
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-19 100.9 158 38.6
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.9e-19 99.4 160 37.5
CSS0018539 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-18 97.8 147 38.1
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-18 97.8 147 38.1
CSS0001339 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-18 97.4 149 37.6
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-18 97.4 147 39.5
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-18 97.4 149 37.6
TWI77G0909 Tripterygium wilfordii HOM05D005012 ORTHO05D005886 1.5e-18 97.4 133 39.8
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.9e-18 97.1 147 37.4
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.5e-18 96.7 147 38.1
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.5e-18 96.7 147 38.1
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.3e-18 95.9 149 36.9
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.6e-18 95.5 152 37.5
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.6e-18 95.5 154 36.4
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.3e-18 95.1 152 36.2
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.3e-18 95.1 152 36.2
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.3e-18 95.1 152 36.2
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.5e-18 94.7 149 36.9
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-17 94.4 149 36.9
FAN13G1160 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.2e-17 94.4 166 36.1
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-17 94.0 152 36.8
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-17 94.0 152 36.8
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-17 94.0 152 36.8
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-17 94.0 154 36.4
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.6e-17 94.0 166 35.5
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.1e-17 93.6 164 35.4
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.6e-17 92.8 166 34.9
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.7e-17 92.4 152 36.2
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.2e-17 92.0 152 34.9
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.4e-16 90.9 157 34.4
FAN04G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.4e-16 90.9 157 34.4
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.4e-16 90.9 157 34.4
FAN15G1881 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.4e-16 90.9 157 34.4
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.4e-16 90.9 157 34.4
FvH4_1g29802 Fragaria vesca HOM05D005012 ORTHO05D005886 2.3e-16 90.1 162 35.2
FAN20G1519 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.3e-16 90.1 166 34.3
FvH4_6g37930 Fragaria vesca HOM05D005012 ORTHO05D005886 3.1e-16 89.7 142 35.9
FAN04G2305 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.2e-15 87.8 167 33.5
FAN19G1173 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.2e-15 87.8 166 34.9
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.5e-15 87.4 162 35.2
FAN07G2178 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.6e-15 86.7 178 33.7
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.4e-15 85.9 154 33.1
FAN11G2763 Fragaria x ananassa HOM05D005012 ORTHO05D008319 5.8e-15 85.5 150 34.0
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 5.8e-15 85.5 156 34.6
CSS0002487 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.5e-15 85.1 109 40.4
CSS0012893 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.5e-15 85.1 109 40.4
CSS0020953 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.5e-15 85.1 109 40.4
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.5e-15 85.1 166 33.7
vmacro03774 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 1.3e-14 84.3 116 40.5
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 1.7e-14 84.0 146 37.7
CSS0032614 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-14 83.6 132 37.1
Rhsim05G0112900 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.2e-14 83.6 127 35.4
CSS0042621 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-14 82.8 111 38.7
CSS0007177 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.9e-14 82.4 109 40.4
CSS0048721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.4e-14 82.0 109 39.4
FAN04G0818 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.3e-14 81.6 159 32.7
FAN26G2799 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.3e-14 81.6 111 37.8
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 5.4e-13 79.0 150 32.7
FAN22G1849 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.5e-12 76.3 160 28.1
CSS0009559 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.6e-12 75.9 108 46.3
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.8e-12 75.1 146 33.6
FvH4_1g28181 Fragaria vesca HOM05D005012 ORTHO05D005886 1.7e-11 73.9 149 30.9
Rhsim07G0081300 Rhododendron simsii HOM05D000074 ORTHO05D002343 8.6e-11 71.6 71 52.1
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 5.6e-10 68.9 127 32.3
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.3e-10 68.6 124 33.9
CSS0009064 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.8e-09 66.6 116 37.1
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.3e-08 63.5 70 42.9
FvH4_6g21851 Fragaria vesca HOM05D005012 ORTHO05D005886 3.1e-08 63.2 79 41.8
vmacro22380 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 4.0e-08 62.8 116 31.9
FAN08G2726 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.2e-08 62.4 81 37.0
CSS0019248 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.8e-08 62.0 71 42.3
FAN06G3934 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.4e-07 59.7 72 37.5
FAN16G2301 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.8e-07 58.9 79 39.2
FvH4_1g28940 Fragaria vesca HOM05D005012 ORTHO05D005886 9.9e-07 58.2 120 32.5
RcHm_v2.0_Chr2g0138651 Rosa chinensis HOM05D005012 ORTHO05D005886 1.7e-06 57.4 50 54.0
CSS0011556 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-06 56.2 64 45.3
CSS0022576 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.4e-06 55.5 71 39.4
CSS0046965 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.4e-06 55.5 54 48.1
RcHm_v2.0_Chr3g0475981 Rosa chinensis HOM05D005012 ORTHO05D005886 6.4e-06 55.5 71 38.0
FvH4_5g37421 Fragaria vesca HOM05D005012 ORTHO05D005886 8.4e-06 55.1 78 37.2


User provided reference genes

Program Settings