Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 1.4e-134 483.0 252 100.0
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 2.0e-125 452.6 252 90.1
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 4.4e-125 451.4 252 89.7
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 4.9e-124 448.0 252 89.3
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.6e-122 443.0 252 87.3
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 6.0e-122 441.0 252 87.7
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 2.3e-121 439.1 252 87.7
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 8.6e-121 437.2 252 87.7
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 3.3e-120 435.3 252 87.7
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 4.3e-120 434.9 252 86.9
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 4.3e-120 434.9 251 86.1
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 9.5e-120 433.7 252 87.3
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 9.5e-120 433.7 252 87.3
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 1.2e-119 433.3 252 85.3
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 86.1
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 86.9
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 85.7
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 2.1e-119 432.6 252 86.9
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 4.7e-119 431.4 252 84.9
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 6.2e-119 431.0 252 84.5
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 8.1e-119 430.6 250 84.8
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 83.7
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 2.4e-118 429.1 252 85.7
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 3.1e-118 428.7 252 84.1
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 4.0e-118 428.3 252 84.5
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 4.0e-118 428.3 252 86.1
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 5.2e-118 427.9 252 85.3
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 8.9e-118 427.2 254 85.0
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 8.9e-118 427.2 252 85.7
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.5e-117 426.4 252 84.5
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 85.7
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 85.3
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 83.3
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 85.3
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 84.1
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 4.4e-117 424.9 252 83.3
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 5.8e-117 424.5 256 85.2
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 5.8e-117 424.5 252 84.5
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 7.6e-117 424.1 252 84.5
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 9.9e-117 423.7 252 83.7
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 9.9e-117 423.7 256 85.2
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 1.7e-116 422.9 254 84.3
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 84.5
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 83.7
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 3.8e-116 421.8 252 84.1
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 3.8e-116 421.8 252 83.3
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 3.8e-116 421.8 252 83.3
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 3.8e-116 421.8 250 84.4
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 4.9e-116 421.4 252 83.7
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 83.3
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 82.5
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 1.4e-115 419.9 252 84.9
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.9e-115 419.5 253 85.8
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 82.9
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 5.4e-115 417.9 250 84.0
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 7.1e-115 417.5 281 76.9
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 7.1e-115 417.5 248 84.3
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 1.2e-114 416.8 252 83.3
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 4.6e-114 414.8 253 84.2
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 82.1
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 1.3e-113 413.3 252 81.7
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 81.7
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 3.0e-113 412.1 260 82.7
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 83.3
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 81.7
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 5.1e-113 411.4 252 81.3
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 1.5e-112 409.8 252 80.6
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 1.9e-112 409.5 283 74.6
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 1.9e-112 409.5 283 74.9
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 82.1
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 7.3e-112 407.5 253 79.1
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 1.2e-111 406.8 239 84.9
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 4.7e-111 404.8 252 81.7
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 2.6e-109 399.1 252 78.6
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 2.6e-109 399.1 252 76.6
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 3.4e-109 398.7 252 78.6
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 4.4e-109 398.3 252 78.6
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 9.9e-109 397.1 252 77.4
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 1.3e-108 396.7 252 77.4
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 2.9e-108 395.6 252 78.2
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 1.9e-107 392.9 252 78.6
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 3.2e-107 392.1 254 78.3
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 9.3e-107 390.6 249 79.1
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 2.1e-106 389.4 252 76.6
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 2.1e-106 389.4 249 79.1
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 3.9e-105 385.2 249 78.7
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 2.5e-104 382.5 259 76.1
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 3.3e-104 382.1 252 77.8
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 5.6e-104 381.3 256 75.8
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 2.4e-102 375.9 256 73.8
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 3.1e-102 375.6 252 75.8
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 5.3e-102 374.8 254 72.8
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.6e-101 372.5 272 74.3
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 2.4e-99 365.9 252 74.2
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 5.4e-99 364.8 252 75.0
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 6.0e-98 361.3 221 83.3
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 2.6e-93 345.9 260 69.6
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 3.4e-93 345.5 267 66.3
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 4.5e-93 345.1 252 71.4
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 9.0e-86 320.9 191 82.2
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 4.5e-85 318.5 190 83.2
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 1.3e-84 317.0 274 63.9
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 4.9e-84 315.1 177 87.6
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.1e-83 313.9 176 86.9
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 3.3e-80 302.4 177 84.7
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 1.4e-78 297.0 252 61.5
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.0e-77 293.1 229 65.9
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 2.0e-72 276.6 278 55.4
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 2.5e-72 276.2 255 56.1
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 2.5e-67 259.6 145 88.3
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 1.8e-65 253.4 254 54.7
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 1.5e-64 250.4 252 56.0
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 2.4e-62 243.0 146 84.9
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.2e-55 219.9 254 48.4
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 1.4e-49 200.7 123 78.0
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 1.0e-36 157.9 91 82.4
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 1.1e-35 154.5 86 90.7
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 1.9e-35 153.7 96 78.1
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 1.2e-26 124.4 95 65.3
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 5.2e-17 92.4 63 69.8
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.9e-14 84.0 48 85.4
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 1.6e-10 70.9 48 72.9
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 2.8e-10 70.1 34 88.2
Actinidia11341 Actinidia chinensis HOM05D006457 ORTHO05D056652 4.4e-08 62.8 40 75.0


User provided reference genes

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