Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 2.1e-132 475.7 238 100.0
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 4.5e-127 458.0 238 95.4
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 7.4e-90 334.3 227 73.1
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 1.0e-83 313.9 226 67.3
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 1.8e-83 313.2 228 65.8
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 5.9e-79 298.1 223 63.2
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 7.7e-79 297.7 227 62.1
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 7.7e-79 297.7 226 61.9
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 3.8e-78 295.4 229 65.1
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 6.5e-78 294.7 226 61.1
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 1.1e-77 293.9 226 63.3
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 1.9e-77 293.1 226 59.7
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 3.2e-77 292.4 226 61.5
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 8.0e-76 287.7 221 62.4
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 1.8e-75 286.6 226 61.1
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 6.8e-75 284.6 247 62.3
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 1.5e-74 283.5 227 59.9
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 4.4e-74 282.0 224 58.9
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 9.8e-74 280.8 221 60.2
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 1.3e-73 280.4 226 60.6
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 8.3e-73 277.7 222 63.1
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 8.3e-73 277.7 224 58.5
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 1.1e-72 277.3 219 60.7
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 1.4e-72 276.9 226 59.3
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 2.4e-72 276.2 230 57.8
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.1e-72 275.8 226 60.6
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 4.1e-72 275.4 226 60.6
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 4.1e-72 275.4 216 61.1
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 4.1e-72 275.4 219 62.6
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 5.4e-72 275.0 226 60.2
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 5.4e-72 275.0 227 58.6
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 9.1e-72 274.2 224 58.0
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 9.1e-72 274.2 228 59.6
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.2e-71 273.9 230 58.7
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.0e-71 273.1 226 60.2
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 2.7e-71 272.7 226 57.5
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.5e-71 272.3 226 60.2
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 7.7e-71 271.2 232 59.5
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 7.7e-71 271.2 226 55.8
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 1.0e-70 270.8 226 57.1
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 1.3e-70 270.4 232 58.2
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.7e-70 270.0 216 59.7
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 1.7e-70 270.0 226 56.6
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 2.3e-70 269.6 212 60.4
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 6.6e-70 268.1 224 58.0
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 8.6e-70 267.7 210 62.4
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 8.6e-70 267.7 226 58.4
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.1e-69 267.3 226 56.2
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 2.5e-69 266.2 225 59.6
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 4.2e-69 265.4 225 56.0
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 5.5e-69 265.0 233 54.1
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 7.2e-69 264.6 223 58.3
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 3.6e-68 262.3 227 57.3
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 8.0e-68 261.2 180 69.4
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 1.8e-67 260.0 225 57.8
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 1.3e-65 253.8 229 55.5
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 3.7e-65 252.3 232 54.7
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 4.9e-65 251.9 223 55.6
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 1.2e-63 247.3 205 59.5
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 2.7e-63 246.1 225 54.7
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 6.6e-62 241.5 228 50.9
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 2.5e-61 239.6 231 51.1
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 5.6e-61 238.4 232 53.0
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 2.1e-60 236.5 232 53.0
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 2.1e-60 236.5 228 51.3
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 4.0e-59 232.3 226 48.2
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 6.8e-59 231.5 228 53.5
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 3.4e-58 229.2 170 64.1
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 7.5e-58 228.0 221 52.0
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 9.8e-58 227.6 224 49.1
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 3.2e-56 222.6 224 50.9
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 5.4e-56 221.9 224 50.9
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 5.4e-56 221.9 210 50.5
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 7.8e-55 218.0 223 51.6
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 1.7e-54 216.9 237 49.4
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 3.9e-54 215.7 162 67.3
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 8.6e-54 214.5 237 45.6
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.6e-52 210.3 232 43.5
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 4.7e-52 208.8 221 46.6
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 1.5e-50 203.8 215 50.7
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 2.7e-47 193.0 172 55.8
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 4.6e-47 192.2 230 41.3
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 7.3e-45 184.9 171 56.7
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 2.2e-33 146.7 144 52.8
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 5.4e-32 142.1 99 68.7
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 1.6e-31 140.6 137 52.6
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 5.1e-30 135.6 162 45.1
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 1.1e-21 107.8 80 60.0
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.5e-21 106.7 100 48.0
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 3.9e-14 82.8 172 30.2


User provided reference genes

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