Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.9e-57 224.6 112 100.0
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.3e-54 214.2 111 95.5
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.2e-52 208.8 111 93.7
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.1e-30 135.2 111 64.9
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 2.0e-29 132.5 112 58.9
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 6.3e-23 110.9 111 52.3
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.7e-20 102.8 111 49.5
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 8.0e-18 94.0 128 48.4
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.4e-17 93.2 116 49.1
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.3e-17 92.4 78 59.0
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 4.0e-17 91.7 116 50.0
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 8.8e-17 90.5 116 50.0
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 2.6e-16 89.0 69 58.0
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 1.4e-14 83.2 113 46.0
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 1.8e-14 82.8 113 45.1
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 1.1e-11 73.6 114 39.5
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.5e-11 73.2 125 42.4
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.9e-11 72.8 72 52.8
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 2.5e-11 72.4 112 41.1
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 4.7e-10 68.2 116 44.0
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 6.1e-10 67.8 46 65.2
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.8e-09 66.2 130 40.0
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 3.0e-09 65.5 109 38.5
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 3.0e-09 65.5 49 59.2
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 3.0e-09 65.5 116 40.5
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 4.0e-09 65.1 49 59.2
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 5.2e-09 64.7 123 41.5
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 5.2e-09 64.7 151 35.1
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 5.2e-09 64.7 136 35.3
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 5.2e-09 64.7 51 54.9
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 6.8e-09 64.3 48 56.2
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 1.2e-08 63.5 115 35.7
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 1.2e-08 63.5 116 36.2
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 1.2e-08 63.5 148 35.1
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.5e-08 63.2 50 56.0
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 5.7e-08 61.2 112 39.3
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 5.7e-08 61.2 51 54.9
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 7.5e-08 60.8 141 36.9
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 7.5e-08 60.8 109 34.9
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.7e-07 59.7 85 40.0
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 4.8e-07 58.2 54 48.1
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.8e-06 56.2 99 39.4
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 3.1e-06 55.5 48 47.9
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 5.4e-06 54.7 132 34.1
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 7.0e-06 54.3 98 38.8
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 9.1e-06 53.9 97 36.1


User provided reference genes

Program Settings