Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034891 Camellia sinensis var. sinensis HOM05D004833 ORTHO05D005671 1.5e-221 772.7 432 100.0
Actinidia40079 Actinidia chinensis HOM05D004833 ORTHO05D005671 6.4e-116 421.8 489 54.2
Dinv29897 Davidia involucrata HOM05D004833 ORTHO05D005671 1.1e-91 341.3 477 47.4
Hma1.2p1_0310F.1_g120780 Hydrangea macrophylla HOM05D004833 ORTHO05D005671 2.2e-76 290.4 504 47.0
Rhsim11G0181500 Rhododendron simsii HOM05D004833 ORTHO05D005671 2.6e-72 276.9 473 43.1
Rhsim04G0155000 Rhododendron simsii HOM05D004833 ORTHO05D005671 7.4e-72 275.4 467 41.8
TAR362G1060 Trochodendron aralioides HOM05D004833 ORTHO05D005671 6.3e-55 219.2 482 38.6
MSTRG.24695 Avicennia marina HOM05D004833 ORTHO05D005671 1.2e-53 214.9 460 40.2
QL06p016027 Quercus lobata HOM05D004833 ORTHO05D005671 2.3e-52 210.7 476 34.9
TAR633G1100 Trochodendron aralioides HOM05D004833 ORTHO05D005671 1.9e-51 207.6 483 40.0
Nn4g25548 Nelumbo nucifera HOM05D004833 ORTHO05D005671 1.2e-50 204.9 479 34.7
Oeu002595.1 Olea europaea HOM05D004833 ORTHO05D005671 4.0e-49 199.9 484 34.7
Sabra10G0033900 Salix brachista HOM05D004833 ORTHO05D005671 2.6e-48 197.2 451 35.5
Cfa008364 Carpinus fangiana HOM05D004833 ORTHO05D005671 3.4e-48 196.8 498 33.5
Potri.010G074900 Populus trichocarpa HOM05D004833 ORTHO05D005671 5.7e-48 196.1 449 36.1
Sed0021810 Sechium edule HOM05D004833 ORTHO05D005671 8.3e-47 192.2 441 35.4
Migut.N00255 Erythranthe guttata HOM05D004833 ORTHO05D005671 7.0e-46 189.1 458 40.0
Manes.03G168000 Manihot esculenta HOM05D004833 ORTHO05D005671 7.0e-46 189.1 437 35.5
HanXRQChr09g0257341 Helianthus annuus HOM05D004833 ORTHO05D005671 9.2e-46 188.7 449 35.6
MELO3C006459.2 Cucumis melo HOM05D004833 ORTHO05D005671 4.6e-45 186.4 458 35.8
FAN17G0464 Fragaria x ananassa HOM05D004833 ORTHO05D005671 1.0e-44 185.3 486 34.4
DCAR_024234 Daucus carota HOM05D004833 ORTHO05D005671 1.3e-44 184.9 442 41.6
HanXRQChr05g0145861 Helianthus annuus HOM05D004833 ORTHO05D005671 1.7e-44 184.5 446 35.4
HanXRQChr11g0331421 Helianthus annuus HOM05D004833 ORTHO05D005671 1.7e-44 184.5 446 35.4
CANSAT78G0301 Cannabis sativa HOM05D004833 ORTHO05D005671 2.3e-44 184.1 434 35.0
FAN17G0043 Fragaria x ananassa HOM05D004833 ORTHO05D005671 2.9e-44 183.7 478 34.3
Lsat_1_v5_gn_4_144160 Lactuca sativa HOM05D004833 ORTHO05D005671 3.9e-44 183.3 442 35.3
CiPaw.02G115600 Carya illinoinensis HOM05D004833 ORTHO05D005671 8.6e-44 182.2 441 38.8
MD16G1211500 Malus domestica HOM05D004833 ORTHO05D005671 1.9e-43 181.0 456 34.4
DCAR_028835 Daucus carota HOM05D004833 ORTHO05D005671 2.5e-43 180.6 446 34.5
Thecc.04G248100 Theobroma cacao HOM05D004833 ORTHO05D005671 4.3e-43 179.9 449 35.2
CsaV3_3G012480 Cucumis sativus L. HOM05D004833 ORTHO05D005671 9.5e-43 178.7 457 35.2
RcHm_v2.0_Chr4g0391131 Rosa chinensis HOM05D004833 ORTHO05D005671 1.2e-42 178.3 460 35.0
TWI53G1508 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 6.2e-42 176.0 429 34.7
TWI53G1633 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 6.2e-42 176.0 429 34.7
TWI09G0514 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 1.8e-41 174.5 427 34.4
ClCG05G004520 Citrullus lanatus HOM05D004833 ORTHO05D005671 4.0e-41 173.3 458 34.5
Peaxi162Scf00209g00118 Petunia axillaris HOM05D004833 ORTHO05D005671 5.2e-41 172.9 491 37.5
Aqoxy4G02560 Aquilegia oxysepala HOM05D004833 ORTHO05D005671 1.5e-40 171.4 442 34.2
Lj6P658T33 Lonicera japonica HOM05D004833 ORTHO05D005671 3.4e-40 170.2 225 45.3
Actinidia04469 Actinidia chinensis HOM05D004833 ORTHO05D005671 4.4e-40 169.9 363 38.8
MBI19_g03257_MAGBIO Magnolia biondii HOM05D004833 ORTHO05D005671 4.4e-40 169.9 455 35.2
Eucgr.G02729 Eucalyptus grandis HOM05D004833 ORTHO05D005671 7.5e-40 169.1 459 35.3
Gorai.005G047200 Gossypium raimondii HOM05D004833 ORTHO05D005671 1.3e-39 168.3 441 34.2
Prupe.1G033600 Prunus persica HOM05D004833 ORTHO05D005671 2.9e-39 167.2 474 37.8
FvH4_4g02980 Fragaria vesca HOM05D004833 ORTHO05D005671 1.1e-38 165.2 499 30.9
Atru.chr4.2164 Acer truncatum HOM05D004833 ORTHO05D005671 1.4e-38 164.9 451 34.1
Gohir.D02G042900 Gossypium hirsutum HOM05D004833 ORTHO05D005671 1.4e-38 164.9 441 34.0
SalBow3G2302 Salvia bowleyana HOM05D004833 ORTHO05D005671 1.9e-38 164.5 442 33.9
Sc25g0004110 Simmondsia chinensis HOM05D004833 ORTHO05D005671 1.9e-38 164.5 511 31.9
SGA_v2.0_scaffold308G48094 Striga asiatica HOM05D004833 ORTHO05D005671 1.9e-38 164.5 468 32.7
FAN12G1135 Fragaria x ananassa HOM05D004833 ORTHO05D005671 5.4e-38 162.9 515 30.7
FAN28G1505 Fragaria x ananassa HOM05D004833 ORTHO05D005671 5.4e-38 162.9 541 31.4
VMungo0251G0345 Vigna mungo HOM05D004833 ORTHO05D005671 7.0e-38 162.5 470 33.0
Duzib212G0317 Durio zibethinus HOM05D004833 ORTHO05D005671 1.2e-37 161.8 431 33.4
arahy.Tifrunner.gnm1.ann1.DI6KST Arachis hypogaea HOM05D004833 ORTHO05D005671 2.0e-37 161.0 461 31.9
Ciclev10005174m.g Citrus clementina HOM05D004833 ORTHO05D005671 2.7e-37 160.6 448 31.5
PSO210G7662 Papaver somniferum HOM05D004833 ORTHO05D005671 2.7e-37 160.6 496 30.0
arahy.Tifrunner.gnm1.ann1.CY5RP0 Arachis hypogaea HOM05D004833 ORTHO05D005671 4.6e-37 159.8 486 30.9
Cpa.g.sc44.108 Carica papaya HOM05D004833 ORTHO05D005671 6.0e-37 159.5 453 32.7
BcaC01g04448 Brassica carinata HOM05D004833 ORTHO05D005671 1.0e-36 158.7 463 31.3
PGR004G1107 Punica granatum HOM05D004833 ORTHO05D005671 1.3e-36 158.3 464 33.0
RcHm_v2.0_Chr7g0211851 Rosa chinensis HOM05D004833 ORTHO05D005671 1.3e-36 158.3 439 33.3
RcHm_v2.0_Chr7g0224291 Rosa chinensis HOM05D004833 ORTHO05D005671 1.3e-36 158.3 430 32.3
Lalb_Chr05g0218581 Lupinus albus HOM05D004833 ORTHO05D005671 2.3e-36 157.5 458 38.2
AT4G14490 Arabidopsis thaliana HOM05D004833 ORTHO05D005671 3.0e-36 157.1 428 31.8
FAN12G1996 Fragaria x ananassa HOM05D004833 ORTHO05D005671 3.0e-36 157.1 198 47.5
Sopen08g026960 Solanum pennellii HOM05D004833 ORTHO05D005671 3.0e-36 157.1 512 36.7
Ciclev10004978m.g Citrus clementina HOM05D004833 ORTHO05D005671 3.9e-36 156.8 446 35.9
Glyma.07G201900 Glycine max HOM05D004833 ORTHO05D005671 3.9e-36 156.8 491 32.4
BcaB04g21413 Brassica carinata HOM05D004833 ORTHO05D005671 6.6e-36 156.0 435 31.5
TPR.G14924 Trifolium pratense HOM05D004833 ORTHO05D005671 6.6e-36 156.0 450 36.9
Gohir.A02G036200 Gossypium hirsutum HOM05D004833 ORTHO05D005671 8.6e-36 155.6 445 33.7
BcaC01g04551 Brassica carinata HOM05D004833 ORTHO05D005671 1.1e-35 155.2 481 31.0
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 3.3e-35 153.7 469 30.7
BraA05t23142Z Brassica rapa HOM05D004833 ORTHO05D005671 1.2e-34 151.8 454 32.6
CAN.G1178.27 Capsicum annuum HOM05D004833 ORTHO05D005671 1.2e-34 151.8 545 33.4
PGSC0003DMG400004768 Solanum tuberosum HOM05D004833 ORTHO05D005671 3.6e-34 150.2 526 34.6
BNapus_Darmor_BZH_scaffold_208p00080 Brassica napus HOM05D004833 ORTHO05D005671 6.2e-34 149.4 501 29.7
BraSC141t45625Z Brassica rapa HOM05D004833 ORTHO05D005671 8.1e-34 149.1 499 29.7
C03p40050 Brassica napus HOM05D005209 ORTHO05D006188 3.1e-33 147.1 511 29.5
BolC3t16270H Brassica oleracea HOM05D005209 ORTHO05D006188 3.1e-33 147.1 511 29.5
Phvul.002G328500 Phaseolus vulgaris HOM05D004833 ORTHO05D005671 3.1e-33 147.1 432 30.8
EL10Ac7g16793 Beta vulgaris HOM05D004833 ORTHO05D005671 4.0e-33 146.7 580 26.9
BcaC09g47698 Brassica carinata HOM05D004833 ORTHO05D005671 5.2e-33 146.4 513 29.4
COL.COLO4_15806 Corchorus olitorius HOM05D004833 ORTHO05D005671 5.2e-33 146.4 431 29.5
QL04p071625 Quercus lobata HOM05D004833 ORTHO05D005671 3.4e-32 143.7 431 33.4
unitig_899.g14712 Utricularia gibba HOM05D004833 ORTHO05D005671 3.4e-32 143.7 460 31.3
BolC1t05907H Brassica oleracea HOM05D004833 ORTHO05D005671 5.8e-32 142.9 513 29.2
CANSAT25G0083 Cannabis sativa HOM05D004833 ORTHO05D005671 5.8e-32 142.9 418 31.1
AL7G41650 Arabidopsis lyrata HOM05D004833 ORTHO05D005671 7.5e-32 142.5 420 30.7
BraA03t12461Z Brassica rapa HOM05D005209 ORTHO05D006188 1.3e-31 141.7 465 29.9
Lj4g0026393 Lotus japonicus HOM05D004833 ORTHO05D005671 1.7e-31 141.4 448 37.5
Nitab4.5_0001381g0160 Nicotiana tabacum HOM05D004833 ORTHO05D005671 1.7e-31 141.4 548 31.8
THA.LOC104808605 Tarenaya hassleriana HOM05D004833 ORTHO05D005671 1.7e-31 141.4 195 43.1
Nitab4.5_0002289g0040 Nicotiana tabacum HOM05D004833 ORTHO05D005671 2.9e-31 140.6 551 32.8
SHI08746 Sapria himalayana HOM05D004833 ORTHO05D005671 8.3e-31 139.0 409 31.1
Carub.0007s2773 Capsella rubella HOM05D004833 ORTHO05D005671 1.1e-30 138.7 437 31.4
Medtr4g088240 Medicago truncatula HOM05D004833 ORTHO05D005671 1.1e-30 138.7 423 29.1
CDE09G0593 Ceratophyllum demersum HOM05D004833 ORTHO05D005671 1.4e-30 138.3 455 34.3
Thhalv10020728m.g Eutrema salsugineum HOM05D004833 ORTHO05D005671 1.9e-30 137.9 471 30.1
Glyma.13G174400 Glycine max HOM05D004833 ORTHO05D005671 1.9e-30 137.9 542 27.9
Duzib151G1051 Durio zibethinus HOM05D004833 ORTHO05D005671 2.4e-30 137.5 417 29.5
A03p32920 Brassica napus HOM05D004833 ORTHO05D005671 7.1e-30 136.0 506 27.9
A05p45200 Brassica napus HOM05D004833 ORTHO05D005671 6.0e-29 132.9 429 30.3
Solyc08g078470.4 Solanum lycopersicum HOM05D004833 ORTHO05D005671 1.7e-28 131.3 198 44.4
ECA234G1378 Erigeron canadensis HOM05D000038 ORTHO05D000423 2.3e-28 131.0 551 33.4
Sp3g01440 Schrenkiella parvula HOM05D004833 ORTHO05D005671 2.3e-28 131.0 515 28.5
Ca_18598_v3 Cicer arietinum L. HOM05D004833 ORTHO05D005671 1.5e-27 128.3 435 33.6
Aa31LG9G2800 Aethionema arabicum HOM05D004833 ORTHO05D005671 1.9e-27 127.9 97 67.0
Ah.15g090410 Amaranthus hybridus HOM05D004833 ORTHO05D005671 1.9e-27 127.9 120 51.7
ECA232G1138 Erigeron canadensis HOM05D004833 ORTHO05D005671 2.5e-27 127.5 558 33.2
BcaC05g30352 Brassica carinata HOM05D004833 ORTHO05D005671 3.3e-27 127.1 458 29.3
C09p75700 Brassica napus HOM05D004833 ORTHO05D005671 5.6e-27 126.3 458 29.3
Medtr4g088235 Medicago truncatula HOM05D004833 ORTHO05D005671 4.7e-26 123.2 514 31.7
Medtr8g069140 Medicago truncatula HOM05D004833 ORTHO05D005671 1.1e-25 122.1 514 31.3
ATR0693G179 Amborella trichopoda HOM05D004833 ORTHO05D005671 1.8e-25 121.3 133 48.1
CARHR076370 Cardamine hirsuta HOM05D004833 ORTHO05D005671 2.3e-25 120.9 561 27.8
MD13G1205500 Malus domestica HOM05D004833 ORTHO05D005671 6.8e-25 119.4 434 28.8
Aa31LG8G9600 Aethionema arabicum HOM05D004833 ORTHO05D005671 8.9e-25 119.0 552 31.7
Carub.0003s0149 Capsella rubella HOM05D004833 ORTHO05D005671 8.9e-25 119.0 139 48.2
HPP92_014115 Vanilla planifolia HOM05D004833 ORTHO05D005671 2.0e-24 117.9 144 47.2
AL3G11690 Arabidopsis lyrata HOM05D004833 ORTHO05D005671 2.6e-24 117.5 97 59.8
ECA232G0897 Erigeron canadensis HOM05D004833 ORTHO05D005671 4.4e-24 116.7 374 35.3
Lj4g0009172 Lotus japonicus HOM05D004833 ORTHO05D005671 5.8e-24 116.3 464 30.8
AT3G02400 Arabidopsis thaliana HOM05D004833 ORTHO05D005671 6.4e-23 112.8 525 31.2
HPP92_002726 Vanilla planifolia HOM05D004833 ORTHO05D005671 9.2e-22 109.0 101 54.5
Psat7g116640 Pisum sativum HOM05D004833 ORTHO05D005671 1.6e-21 108.2 497 31.2
HPP92_002667 Vanilla planifolia HOM05D004833 ORTHO05D005671 2.7e-21 107.5 416 29.3
Lj6P658T32 Lonicera japonica HOM05D004833 ORTHO05D005671 1.7e-20 104.8 123 51.2
unitig_52.g17411 Utricularia gibba HOM05D004833 ORTHO05D005671 1.7e-20 104.8 352 29.3
SEGI_17679 Sequoiadendron giganteum HOM05D004833 ORTHO05D005671 2.3e-20 104.4 98 54.1
CDE02G0054 Ceratophyllum demersum HOM05D004833 ORTHO05D005671 3.0e-20 104.0 445 29.9
Os03g0728500 Oryza sativa ssp. japonica HOM05D004833 ORTHO05D005671 3.9e-20 103.6 109 47.7
Zm00001eb215540 Zea mays HOM05D004833 ORTHO05D005671 4.0e-17 93.6 132 40.2
Zm00001eb056120 Zea mays HOM05D004833 ORTHO05D005671 6.8e-17 92.8 141 38.3
BolC5t35084H Brassica oleracea HOM05D004833 ORTHO05D005671 9.3e-14 82.4 136 39.7
Pp3c19_11080 Physcomitrium patens HOM05D004833 ORTHO05D005671 6.6e-12 76.3 114 37.7
Mapoly0067s0089 Marchantia polymorpha HOM05D004833 ORTHO05D005671 2.5e-11 74.3 106 41.5
CiPaw.01G189200 Carya illinoinensis HOM05D004833 ORTHO05D005671 4.3e-11 73.6 161 39.1
Pp3c18_4140 Physcomitrium patens HOM05D004833 ORTHO05D005671 9.6e-11 72.4 101 42.6
Phvul.002G234300 Phaseolus vulgaris HOM05D004833 ORTHO05D005671 2.8e-10 70.9 56 58.9
SGA_v2.0_scaffold93G28322 Striga asiatica HOM05D004184 ORTHO05D004863 6.2e-10 69.7 48 64.6
Medtr3g092440 Medicago truncatula HOM05D004833 ORTHO05D005671 1.1e-09 68.9 73 49.3
PRCOL_00002026 Prasinoderma coloniale HOM05D004833 ORTHO05D005671 2.4e-09 67.8 115 38.3
AagrBONN_evm.TU.Sc2ySwM_368.3218 Anthoceros agrestis HOM05D004833 ORTHO05D005671 2.2e-07 61.2 205 28.8
A06p04460 Brassica napus HOM05D010442 ORTHO05D010690 2.9e-07 60.8 119 34.5
CBR_g21751 Chara braunii HOM05D004833 ORTHO05D005671 1.1e-06 58.9 107 33.6
BcaC01g04549 Brassica carinata HOM05D004833 ORTHO05D005671 2.4e-06 57.8 53 49.1
Cre09.g402350 Chlamydomonas reinhardtii HOM05D004833 ORTHO05D005671 2.4e-06 57.8 101 32.7


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