Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.2e-157 559.7 273 100.0
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 2.2e-77 293.1 223 70.9
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 3.5e-75 285.8 241 64.3
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 4.7e-72 275.4 223 68.2
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 1.0e-66 257.7 242 59.1
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 8.0e-64 248.1 230 58.7
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 1.2e-62 244.2 241 56.0
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 1.2e-62 244.2 242 57.4
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 2.0e-62 243.4 223 57.8
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 2.6e-62 243.0 223 59.2
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 2.6e-62 243.0 293 50.9
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 3.4e-62 242.7 241 55.6
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 4.4e-62 242.3 294 50.7
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 1.3e-61 240.7 230 58.3
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 2.2e-61 240.0 241 55.2
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 4.9e-61 238.8 223 59.2
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 6.4e-61 238.4 240 55.0
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 4.1e-60 235.7 230 54.8
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 9.2e-60 234.6 223 55.2
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 2.1e-59 233.4 242 55.0
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 3.5e-59 232.6 236 55.1
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 7.8e-59 231.5 225 57.3
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 3.9e-58 229.2 241 54.8
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 5.1e-58 228.8 223 57.4
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.5e-57 227.3 223 52.9
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 1.5e-57 227.3 223 54.7
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 4.3e-57 225.7 223 54.3
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 9.5e-57 224.6 253 51.0
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 1.2e-56 224.2 241 49.8
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.2e-56 224.2 241 49.8
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.2e-56 224.2 241 49.8
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 2.8e-56 223.0 242 53.7
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 4.7e-56 222.2 241 49.8
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 6.2e-56 221.9 240 55.0
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 1.4e-55 220.7 240 54.6
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.3e-55 219.9 240 54.6
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 3.1e-55 219.5 240 54.2
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 4.0e-55 219.2 230 51.3
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 8.9e-55 218.0 230 52.2
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 7.5e-54 214.9 225 52.9
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.7e-53 213.8 240 53.8
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 1.2e-51 207.6 238 52.5
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 4.6e-51 205.7 235 53.2
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 1.3e-50 204.1 241 48.5
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 5.1e-50 202.2 240 48.3
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 1.5e-49 200.7 231 49.8
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 1.5e-49 200.7 225 52.4
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 1.9e-49 200.3 243 50.2
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 5.6e-49 198.7 209 51.7
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 9.6e-49 198.0 224 51.8
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 1.2e-48 197.6 227 50.7
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 8.1e-48 194.9 232 50.9
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 2.4e-47 193.4 242 45.5
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 5.2e-47 192.2 218 50.0
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 2.6e-46 189.9 248 48.4
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 5.8e-46 188.7 243 47.7
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 5.8e-46 188.7 228 49.6
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 9.9e-46 188.0 241 43.6
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 1.3e-45 187.6 244 47.5
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 1.3e-45 187.6 234 48.7
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 5.4e-44 182.2 253 43.9
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 1.6e-43 180.6 223 46.2
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 1.6e-43 180.6 232 47.0
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 2.1e-43 180.3 229 48.5
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 1.3e-42 177.6 228 46.1
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 3.0e-42 176.4 244 45.5
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 3.0e-42 176.4 241 42.3
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 8.7e-42 174.9 244 45.1
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 3.6e-40 169.5 245 44.5
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 9.0e-39 164.9 231 43.3
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 2.0e-38 163.7 246 40.2
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 2.1e-35 153.7 217 45.2
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 7.8e-35 151.8 144 58.3
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 1.7e-34 150.6 231 42.0
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 8.7e-34 148.3 287 37.6
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 8.7e-34 148.3 287 37.6
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 8.1e-32 141.7 223 42.2
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 1.1e-31 141.4 318 35.2
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.4e-31 141.0 287 36.9
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 9.0e-31 138.3 161 52.8
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 2.2e-29 133.7 243 37.0
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 8.4e-29 131.7 374 32.9
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 1.9e-28 130.6 90 68.9
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 4.2e-28 129.4 225 37.3
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 5.4e-28 129.0 174 48.9
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 5.1e-26 122.5 231 35.1
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 2.5e-25 120.2 91 69.2
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 8.1e-24 115.2 74 75.7
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 4.5e-22 109.4 234 34.2
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 1.3e-21 107.8 74 73.0
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 6.0e-19 99.0 70 67.1
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 3.7e-16 89.7 269 28.3
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 6.2e-16 89.0 123 42.3
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 7.1e-12 75.5 50 68.0
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 1.6e-08 64.3 120 31.7
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 4.8e-08 62.8 39 69.2
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 7.7e-06 55.5 62 45.2


User provided reference genes

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