Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 8.6e-114 413.7 212 100.0
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 3.1e-47 192.6 196 56.1
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 9.1e-47 191.0 172 62.8
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 7.2e-44 181.4 172 57.6
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 4.7e-43 178.7 172 58.1
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 1.3e-40 170.6 172 55.8
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 1.3e-40 170.6 204 50.0
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 1.3e-40 170.6 201 49.8
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 4.8e-40 168.7 171 55.0
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 8.2e-40 167.9 172 54.1
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 1.1e-39 167.5 171 55.6
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 1.1e-39 167.5 171 52.6
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 1.1e-39 167.5 175 55.4
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.8e-39 166.8 171 55.0
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 1.8e-39 166.8 172 54.7
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 2.4e-39 166.4 171 54.4
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 2.4e-39 166.4 171 54.4
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 3.1e-39 166.0 172 54.7
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 3.1e-39 166.0 171 54.4
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 4.1e-39 165.6 171 53.2
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 4.1e-39 165.6 171 55.0
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 5.3e-39 165.2 171 51.5
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 5.3e-39 165.2 170 56.5
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 7.0e-39 164.9 168 54.8
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 7.0e-39 164.9 172 54.7
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 7.0e-39 164.9 171 53.8
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 9.1e-39 164.5 172 54.1
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 1.2e-38 164.1 176 54.5
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 1.2e-38 164.1 172 52.9
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 1.6e-38 163.7 171 52.6
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 2.6e-38 162.9 194 48.5
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 3.5e-38 162.5 171 53.8
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 4.5e-38 162.2 189 51.3
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 5.9e-38 161.8 175 50.9
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 5.9e-38 161.8 171 53.8
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 7.7e-38 161.4 170 52.4
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 1.3e-37 160.6 172 53.5
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 1.7e-37 160.2 171 51.5
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 2.2e-37 159.8 171 52.0
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 2.2e-37 159.8 194 46.9
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 2.9e-37 159.5 171 52.0
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 2.9e-37 159.5 171 50.9
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 3.8e-37 159.1 221 46.6
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 5.0e-37 158.7 170 51.8
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 1.5e-36 157.1 170 51.2
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 1.9e-36 156.8 171 50.9
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 2.5e-36 156.4 171 49.7
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 4.2e-36 155.6 170 50.6
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 9.4e-36 154.5 170 50.0
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 1.6e-35 153.7 170 48.8
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 2.1e-35 153.3 171 50.9
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 2.7e-35 152.9 171 49.7
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 2.7e-35 152.9 202 47.0
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 3.6e-35 152.5 201 45.3
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 4.7e-35 152.1 171 49.7
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 1.0e-34 151.0 173 50.9
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 1.0e-34 151.0 173 53.8
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 1.8e-34 150.2 173 49.7
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 1.8e-34 150.2 204 44.1
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 4.0e-34 149.1 194 44.8
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 5.2e-34 148.7 204 44.1
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 5.2e-34 148.7 172 50.6
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 6.7e-34 148.3 172 50.0
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 2.0e-33 146.7 172 48.8
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 2.6e-33 146.4 172 48.8
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 2.6e-33 146.4 171 52.6
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 5.7e-33 145.2 172 48.8
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 5.7e-33 145.2 172 52.3
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 7.5e-33 144.8 173 48.6
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 7.5e-33 144.8 172 51.7
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 9.7e-33 144.4 172 48.8
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 4.8e-32 142.1 172 47.7
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 8.2e-32 141.4 181 46.4
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 1.4e-31 140.6 176 49.4
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 1.4e-31 140.6 171 49.7
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 1.8e-31 140.2 172 47.7
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 4.1e-31 139.0 172 48.8
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 1.2e-30 137.5 197 44.2
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 1.2e-30 137.5 172 47.1
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 1.6e-30 137.1 206 43.2
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 3.5e-30 136.0 197 43.7
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 3.8e-29 132.5 171 47.4
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 5.0e-29 132.1 176 41.5
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 8.5e-29 131.3 169 43.8
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 1.1e-28 131.0 169 45.6
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 1.5e-28 130.6 195 42.6
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 2.5e-28 129.8 169 44.4
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 1.2e-27 127.5 170 42.9
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 1.2e-27 127.5 170 44.7
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 1.2e-27 127.5 168 45.2
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 8.0e-27 124.8 201 40.8
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 8.0e-27 124.8 177 42.4
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 3.0e-26 122.9 141 51.1
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 2.0e-25 120.2 171 40.9
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 3.4e-25 119.4 150 44.7
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 5.4e-23 112.1 130 50.0
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 5.0e-21 105.5 164 40.2
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 6.8e-18 95.1 109 52.3
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 1.8e-15 87.0 148 37.8
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 1.5e-12 77.4 61 67.2
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 1.0e-10 71.2 58 51.7
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 1.5e-09 67.4 160 30.6
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.3e-08 64.3 90 40.0
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 2.7e-06 56.6 43 62.8


User provided reference genes

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