Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034846 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 2.6e-132 475.3 233 100.0
CSS0001854 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 2.0e-63 246.5 215 65.1
vmacro04846 Vaccinium macrocarpon HOM05D006557 ORTHO05D008177 2.2e-54 216.5 215 57.7
Rhsim01G0154800 Rhododendron simsii HOM05D006557 ORTHO05D008177 8.4e-54 214.5 216 57.9
Actinidia33449 Actinidia chinensis HOM05D006557 ORTHO05D008177 3.2e-53 212.6 215 56.7
Dinv32417 Davidia involucrata HOM05D006557 ORTHO05D008177 2.7e-52 209.5 216 56.5
TAR375G0852 Trochodendron aralioides HOM05D006557 ORTHO05D008177 3.3e-50 202.6 215 54.0
Prupe.2G153600 Prunus persica HOM05D006557 ORTHO05D008177 1.6e-49 200.3 213 54.5
Peaxi162Scf00021g00314 Petunia axillaris HOM05D006557 ORTHO05D008177 3.7e-49 199.1 216 54.2
Hma1.2p1_0033F.1_g020720 Hydrangea macrophylla HOM05D006557 ORTHO05D008177 4.8e-49 198.7 183 59.0
Manes.01G262900 Manihot esculenta HOM05D006557 ORTHO05D008177 6.2e-49 198.4 215 52.6
Nitab4.5_0006706g0040 Nicotiana tabacum HOM05D006557 ORTHO05D008177 1.1e-48 197.6 215 52.6
CANSAT56G3931 Cannabis sativa HOM05D006557 ORTHO05D008177 1.8e-48 196.8 214 50.5
Lj9A576T36 Lonicera japonica HOM05D006557 ORTHO05D008177 1.8e-48 196.8 223 51.6
FvH4_7g12930 Fragaria vesca HOM05D006557 ORTHO05D008177 6.9e-48 194.9 160 61.2
FAN06G2259 Fragaria x ananassa HOM05D006557 ORTHO05D008177 6.9e-48 194.9 160 61.2
Lsat_1_v5_gn_7_8181 Lactuca sativa HOM05D006557 ORTHO05D008177 2.0e-47 193.4 212 52.4
FAN03G1058 Fragaria x ananassa HOM05D006557 ORTHO05D008177 2.6e-47 193.0 160 60.6
Cfa004174 Carpinus fangiana HOM05D006557 ORTHO05D008177 3.4e-47 192.6 215 52.1
Nitab4.5_0009025g0010 Nicotiana tabacum HOM05D006557 ORTHO05D008177 1.0e-46 191.0 227 49.8
RcHm_v2.0_Chr1g0352061 Rosa chinensis HOM05D006557 ORTHO05D008177 1.0e-46 191.0 215 52.6
Solyc01g091860.4 Solanum lycopersicum HOM05D006557 ORTHO05D008177 1.3e-46 190.7 216 52.8
FAN10G0459 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.7e-46 190.3 215 51.2
QL08p050821 Quercus lobata HOM05D006557 ORTHO05D008177 2.9e-46 189.5 213 54.0
Sc02g0002240 Simmondsia chinensis HOM05D006557 ORTHO05D008177 2.9e-46 189.5 224 49.1
Sopen01g037630 Solanum pennellii HOM05D006557 ORTHO05D008177 2.9e-46 189.5 216 52.8
DCAR_008582 Daucus carota HOM05D006557 ORTHO05D008177 3.8e-46 189.1 215 51.6
CiPaw.01G052200 Carya illinoinensis HOM05D006557 ORTHO05D008177 4.9e-46 188.7 214 52.8
Nn6g34278 Nelumbo nucifera HOM05D006557 ORTHO05D008177 4.9e-46 188.7 215 50.7
Potri.014G077700 Populus trichocarpa HOM05D006557 ORTHO05D008177 8.4e-46 188.0 215 48.8
Oeu058605.1 Olea europaea HOM05D006557 ORTHO05D008177 1.4e-45 187.2 215 51.6
PGSC0003DMG400000131 Solanum tuberosum HOM05D006557 ORTHO05D008177 1.4e-45 187.2 216 52.3
FAN01G0615 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.9e-45 186.8 215 50.2
Cc02_g37160 Coffea canephora HOM05D006557 ORTHO05D008177 3.2e-45 186.0 213 51.2
FAN10G2465 Fragaria x ananassa HOM05D006557 ORTHO05D008177 3.2e-45 186.0 215 51.2
MBI04_g40842_MAGBIO Magnolia biondii HOM05D006557 ORTHO05D008177 9.3e-45 184.5 213 51.2
Glyma.18G228300 Glycine max HOM05D006557 ORTHO05D008177 2.7e-44 183.0 215 48.8
BraA09t42268Z Brassica rapa HOM05D006557 ORTHO05D008177 4.6e-44 182.2 158 60.1
Thhalv10007294m.g Eutrema salsugineum HOM05D006557 ORTHO05D008177 4.6e-44 182.2 216 50.9
TWI23G0976 Tripterygium wilfordii HOM05D006557 ORTHO05D008177 4.6e-44 182.2 215 49.3
Atru.chr5.396 Acer truncatum HOM05D006557 ORTHO05D008177 1.3e-43 180.6 215 49.8
Glyma.09G263800 Glycine max HOM05D006557 ORTHO05D008177 1.8e-43 180.3 215 47.4
Lalb_Chr01g0021061 Lupinus albus HOM05D006557 ORTHO05D008177 1.8e-43 180.3 215 48.4
AUR62033372 Chenopodium quinoa HOM05D006557 ORTHO05D008177 3.9e-43 179.1 213 49.3
Haze_15235 Corylus avellana HOM05D006557 ORTHO05D008177 3.9e-43 179.1 249 45.8
Lj1g0000530 Lotus japonicus HOM05D006557 ORTHO05D008177 3.9e-43 179.1 213 47.4
Aqoxy7G00469 Aquilegia oxysepala HOM05D006557 ORTHO05D008177 5.1e-43 178.7 215 47.4
Ciclev10019481m.g Citrus clementina HOM05D006557 ORTHO05D008177 6.7e-43 178.3 216 48.6
Sp1g00380 Schrenkiella parvula HOM05D006557 ORTHO05D008177 6.7e-43 178.3 215 49.3
C08p53930 Brassica napus HOM05D006557 ORTHO05D008177 8.7e-43 177.9 175 54.3
BolC8t52906H Brassica oleracea HOM05D006557 ORTHO05D008177 8.7e-43 177.9 175 54.3
Atru.chr5.390 Acer truncatum HOM05D006557 ORTHO05D008177 1.9e-42 176.8 215 49.3
PSO478G0993 Papaver somniferum HOM05D006557 ORTHO05D008177 2.5e-42 176.4 213 47.9
EL10Ac1g00969 Beta vulgaris HOM05D006557 ORTHO05D008177 3.3e-42 176.0 173 54.9
MSTRG.17229 Avicennia marina HOM05D006557 ORTHO05D008177 4.3e-42 175.6 215 49.8
Psat3g112120 Pisum sativum HOM05D006557 ORTHO05D008177 4.3e-42 175.6 215 47.9
AUR62004285 Chenopodium quinoa HOM05D006557 ORTHO05D008177 9.7e-42 174.5 156 58.3
HanXRQChr04g0121771 Helianthus annuus HOM05D006557 ORTHO05D008177 9.7e-42 174.5 212 48.1
Sabra14G0054700 Salix brachista HOM05D006557 ORTHO05D008177 1.3e-41 174.1 198 47.5
MELO3C024600.2 Cucumis melo HOM05D006557 ORTHO05D008177 1.6e-41 173.7 222 47.7
ECA236G4623 Erigeron canadensis HOM05D006557 ORTHO05D008177 1.6e-41 173.7 215 50.7
CARHR000440 Cardamine hirsuta HOM05D006557 ORTHO05D008177 2.8e-41 172.9 174 52.3
Medtr7g076590 Medicago truncatula HOM05D006557 ORTHO05D008177 2.8e-41 172.9 213 47.4
Migut.B01677 Erythranthe guttata HOM05D006557 ORTHO05D008177 3.7e-41 172.6 203 49.8
Sed0001202 Sechium edule HOM05D006557 ORTHO05D008177 3.7e-41 172.6 174 53.4
Aa31LG1G11240 Aethionema arabicum HOM05D006557 ORTHO05D008177 4.8e-41 172.2 215 48.4
Carub.0001s0032 Capsella rubella HOM05D006557 ORTHO05D008177 4.8e-41 172.2 206 49.5
Phvul.008G069900 Phaseolus vulgaris HOM05D006557 ORTHO05D008177 4.8e-41 172.2 215 45.6
Hund27329 Selenicereus undatus HOM05D006557 ORTHO05D008177 6.3e-41 171.8 242 44.6
ClCG01G015140 Citrullus lanatus HOM05D006557 ORTHO05D008177 1.1e-40 171.0 173 53.8
arahy.Tifrunner.gnm1.ann1.P0RXA9 Arachis hypogaea HOM05D006557 ORTHO05D008177 1.4e-40 170.6 215 46.0
Eucgr.E00220 Eucalyptus grandis HOM05D006557 ORTHO05D008177 1.4e-40 170.6 215 47.0
GSVIVG01026363001 Vitis vinifera HOM05D006557 ORTHO05D008177 1.4e-40 170.6 184 52.2
Gorai.001G172000 Gossypium raimondii HOM05D006557 ORTHO05D008177 2.4e-40 169.9 216 44.9
Duzib133G0555 Durio zibethinus HOM05D006557 ORTHO05D008177 5.3e-40 168.7 215 45.1
Gohir.D07G150201 Gossypium hirsutum HOM05D006557 ORTHO05D008177 5.3e-40 168.7 216 44.4
COL.COLO4_12633 Corchorus olitorius HOM05D006557 ORTHO05D008177 6.9e-40 168.3 213 46.0
CsaV3_6G041250 Cucumis sativus L. HOM05D006557 ORTHO05D008177 6.9e-40 168.3 214 47.7
TPR.G37774 Trifolium pratense HOM05D006557 ORTHO05D008177 9.0e-40 167.9 215 46.5
Gohir.A07G144300 Gossypium hirsutum HOM05D006557 ORTHO05D008177 1.2e-39 167.5 216 44.0
AL1G10410 Arabidopsis lyrata HOM05D006557 ORTHO05D008177 1.5e-39 167.2 215 47.9
PGR042G0062 Punica granatum HOM05D006557 ORTHO05D008177 2.6e-39 166.4 213 46.5
Thecc.01G369600 Theobroma cacao HOM05D006557 ORTHO05D008177 5.0e-38 162.2 184 49.5
ATR0757G115 Amborella trichopoda HOM05D006557 ORTHO05D008177 1.7e-33 147.1 213 42.7
HPP92_025368 Vanilla planifolia HOM05D006557 ORTHO05D008177 3.7e-33 146.0 207 40.6
SalBow3G2355 Salvia bowleyana HOM05D006557 ORTHO05D008177 1.5e-31 140.6 214 41.6
Zm00001eb269430 Zea mays HOM05D006557 ORTHO05D008177 1.0e-30 137.9 212 39.2
HPP92_025494 Vanilla planifolia HOM05D006557 ORTHO05D008177 1.4e-29 134.0 168 42.3
Os06g0127200 Oryza sativa ssp. japonica HOM05D006557 ORTHO05D008177 1.9e-29 133.7 212 37.7
AT1G01920 Arabidopsis thaliana HOM05D006557 ORTHO05D008177 1.8e-27 127.1 135 50.4
arahy.Tifrunner.gnm1.ann1.1L2ERA Arachis hypogaea HOM05D006557 ORTHO05D008177 5.1e-27 125.6 136 50.7
VMungo1383G3400 Vigna mungo HOM05D006557 ORTHO05D008177 3.7e-25 119.4 159 43.4
unitig_8.g3814 Utricularia gibba HOM05D006557 ORTHO05D008177 1.4e-24 117.5 178 41.6
CDE11G0468 Ceratophyllum demersum HOM05D006557 ORTHO05D008177 6.5e-22 108.6 107 49.5
Mapoly0052s0068 Marchantia polymorpha HOM05D006557 ORTHO05D008177 6.1e-20 102.1 213 34.7
Pp3c20_15200 Physcomitrium patens HOM05D006557 ORTHO05D008177 6.1e-20 102.1 218 32.6
unitig_31.g34034 Utricularia gibba HOM05D006557 ORTHO05D008177 2.8e-17 93.2 150 41.3
MD02G1195000 Malus domestica HOM05D006557 ORTHO05D008177 4.1e-16 89.4 81 56.8
Glyma.15G277300 Glycine max HOM05D006557 ORTHO05D008177 1.2e-15 87.8 79 55.7
AagrBONN_evm.TU.Sc2ySwM_228.962 Anthoceros agrestis HOM05D006557 ORTHO05D008177 1.6e-15 87.4 225 30.7
SEGI_29223 Sequoiadendron giganteum HOM05D006557 ORTHO05D008177 1.5e-13 80.9 133 38.3
SMO165G0089 Selaginella moellendorffii HOM05D006557 ORTHO05D008177 2.5e-13 80.1 207 29.0
CAN.G170.58 Capsicum annuum HOM05D006557 ORTHO05D008177 2.8e-09 66.6 96 46.9
CAN.G170.57 Capsicum annuum HOM05D006557 ORTHO05D008177 3.7e-09 66.2 43 69.8
FAN06G3640 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.4e-08 64.3 150 30.7


User provided reference genes

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